bd1426 (bd1426) psbZThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd1426	bd_26x41	(bd1426) psbZ	9890	10075	-	psbZ

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0024

Most Highly Correlated Transcripts

ThpsCp056 (psbZ) photosystem II protein Z 1	bd1441 (bd1441) ccsA 0.9459	ThpsCp088 (ccsA) cytochrome c biogenesis protein 0.9459	ThpsCp128 (ccsA) cytochrome c biogenesis protein 0.9459	ThpsCp051 (psbK) photosystem II protein K 0.9386	bd1048 (bd1048) PS_I_psaC 0.9202
ThpsCp087 (psaC) photosystem I subunit VII 0.9202	ThpsCp129 (psaC) photosystem I subunit VII 0.9202	36557 PAP_fibrillin superfamily 0.9063	bd1342 (bd1342) psaL 0.9031

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
psbZ		photosystem II protein Z	cl09269	56.5673	1.28E-12	1 - 59	specific	177021
Ycf9 superfamily		YCF9; This family consists of the hypothetical protein product of the YCF9 gene from chloroplasts...	-	56.5673	1.28E-12	1 - 59	superfamily	263746

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Metabolic pathways	map01100

GO Terms

Not available -

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