bd938 (bd938) PBP2_NikA_DppA_OppA_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd938 bd_23x33 (bd938) PBP2_NikA_DppA_OppA_like superfamily 116316 118804 + PBP2_NikA_DppA_OppA_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0304

Most Highly Correlated Transcripts

4969

hypothetical protein
0.9429

264152

0.9119

4043

KAP
0.9117

5970

DUF1619 superfamily
0.9084

1726

hypothetical protein
0.907

24199

hypothetical protein
0.898

10989

hypothetical protein
0.8966

3389

hypothetical protein
0.895

23802

(Tp_HSF_2.7e) HSF_DNA-bind superfamily
0.8944

10501

(DES2) Delta6-FADS-like
0.8919

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PBP2_NikA_DppA_OppA_like superfamily The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the... - 66.0959 9.23E-12 37 - 194 superfamily 261038
PBP2_NikA_DppA_OppA_like superfamily The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the... - 66.0959 9.23E-12 37 - 194 superfamily 261038
DdpA ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism] - 165.504 3.05E-44 202 - 576 multi-dom 223818

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49168 PHATRDRAFT_49168 Not available 66961 113427 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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