PHATRDRAFT_17332 band 7 protein (SPFH_paraslipin)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_17332	chr_1	band 7 protein (SPFH_paraslipin)	623947	625104	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0145

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0256	0.28	270 1600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SPFH_paraslipin		Paraslipin or slipin-2 (SLP-2, a subgroup of the stomatin-like proteins (slipins) family; belonging...	cl19107	163.029	5.74E-49	93 - 201	specific	259811
SPFH_like superfamily		core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; This model...	-	163.029	5.74E-49	93 - 201	superfamily	267460
PHB		prohibitin homologues; prohibitin homologues	-	127.777	3.62E-35	56 - 213	multi-dom	214581

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
32022		Not available	270061	3733	441105	Cre19.g750847.t1.1	AT5G54100.1	344101

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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