32022 SPFH_paraslipin
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32022 chr_2 SPFH_paraslipin 1312681 1314186 + SPFH_paraslipin

Synonyms

NCBI ID Ensembl Genomes exon ID
7450407 Thaps32022.1, Thaps32022.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0196

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0274
 0.39

Most Highly Correlated Transcripts

6693

hypothetical protein
0.9119

7953

AIM24
0.9073

23958

Aldose_epim superfamily
0.9053

261400

NA
0.9

35314

GSH_Peroxidase
0.899

16295

FBPase
0.8979

264647

p450 superfamily
0.8968

6243

Macro superfamily
0.8956

263315

Peptidase_C65
0.8955

3354

hypothetical protein
0.895

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SPFH_paraslipin Paraslipin or slipin-2 (SLP-2, a subgroup of the stomatin-like proteins (slipins) family; belonging... cl19107 158.406 6.14E-47 162 - 272 specific 259811
SPFH_like superfamily core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; This model... - 158.406 6.14E-47 162 - 272 superfamily 267460
PHB prohibitin homologues; prohibitin homologues - 130.858 4.20E-36 125 - 282 multi-dom 214581

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_17332 PHATRDRAFT_17332 268355 3733 441105 Cre19.g750847.t1.1 AT5G54100.1 344101

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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