PHATRDRAFT_18080 phosphoribosylamidoimidazole-succinocarboxamide synthase (SAICAR_synt_Sc)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_18080	chr_2	phosphoribosylamidoimidazole-succinocarboxamide synthase (SAICAR_synt_Sc)	300886	301816	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0016

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0085	0.45	490000 680000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SAICAR_synt_Sc		non-metazoan 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase;...	cl00231	320.265	2.41E-109	5 - 244	specific	133469
SAICAR_synt superfamily		5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase; SAICAR synthetase (the...	-	320.265	2.41E-109	5 - 244	superfamily	260283

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268443		Not available	159093	320105	423817	Cre03.g202113.t1.1	AT3G21110.2	513619

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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