PHATRDRAFT_31525 aspartyl protease family protein (pepsin_retropepsin_like superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_31525 chr_1 aspartyl protease family protein (pepsin_retropepsin_like superfamily) 284490 287886 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0061

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0186
 0.24

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
pepsin_retropepsin_like superfamily Cellular and retroviral pepsin-like aspartate proteases; This family includes both cellular and... - 145.214 9.76E-38 205 - 471 superfamily 264354
Asp Eukaryotic aspartyl protease; Aspartyl (acid) proteases include pepsins, cathepsins, and renins.... - 78.8703 5.78E-16 209 - 597 multi-dom 249520

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
7584 Not available Not available 262714 221566 Cre01.g051950.t1.2 AT5G43100.1 474645

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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