PHATRDRAFT_38067 anaerobic glycerol-3-phosphate dehydrogenase protein (COG0579)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_38067	chr_14	anaerobic glycerol-3-phosphate dehydrogenase protein (COG0579)	796853	799295	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0123

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0180	0.25	1.3 45

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PRK11728 superfamily		hydroxyglutarate oxidase; Provisional	-	109.911	5.07E-26	65 - 440	superfamily	267509
Fer2_BFD		BFD-like [2Fe-2S] binding domain; The two Fe ions are each coordinated by two conserved cysteine...	cl01093	46.9358	8.79E-07	600 - 660	specific	252526
Fer2_BFD superfamily		BFD-like [2Fe-2S] binding domain; The two Fe ions are each coordinated by two conserved cysteine...	-	46.9358	8.79E-07	600 - 660	superfamily	260786
COG0579		Predicted dehydrogenase [General function prediction only]	-	242.176	3.71E-72	64 - 612	multi-dom	223652

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268615		Not available	Not available	Not available	238059	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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