PHATRDRAFT_4014 peptidase family s49 protein (S49_Sppa_N_C)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_4014	chr_23	peptidase family s49 protein (S49_Sppa_N_C)	121416	122063	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0194

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0165	0.45	0.041 2100

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
S49_Sppa_N_C		Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad; Signal peptide...	cl15763	156.879	2.30E-47	53 - 201	specific	132934
Clp_protease_like superfamily		Caseinolytic protease (ClpP) is an ATP-dependent protease; Clp protease (caseinolytic protease;...	-	156.879	2.30E-47	53 - 201	superfamily	265774
Peptidase_S49_N superfamily		Peptidase family S49 N-terminal; This domain is found to the N-terminus of bacterial signal...	-	53.3125	1.66E-09	1 - 58	superfamily	254835

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
16193		Not available	186872	233786	456568	Cre06.g267700.t1.2	AT1G73990.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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