PHATRDRAFT_42100 polymeraseiii (dna directed) polypeptide155kda (PRK08566)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42100 chr_12 polymeraseiii (dna directed) polypeptide155kda (PRK08566) 373133 377428 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0259

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RNAP_III_RPC1_N Largest subunit (RPC1) of eukaryotic RNA polymerase III (RNAP III), N-terminal domain; Rpc1 (C160)... cl19114 1435.03 0 1 - 846 specific 259847
RNAP_largest_subunit_N superfamily Largest subunit of RNA polymerase (RNAP), N-terminal domain; This region represents the N-terminal... - 1435.03 0 1 - 846 superfamily 267467
RNAP_III_Rpc1_C Largest subunit (Rpc1) of Eukaryotic RNA polymerase III (RNAP III), C-terminal domain; Eukaryotic... cl11429 517.927 3.10E-173 957 - 1272 specific 132723
RNAP_largest_subunit_C superfamily Largest subunit of RNA polymerase (RNAP), C-terminal domain; RNA polymerase (RNAP) is a large multi... - 517.927 3.10E-173 957 - 1272 superfamily 142634
PRK08566 DNA-directed RNA polymerase subunit A'; Validated - 900.375 0 6 - 879 multi-dom 236292
RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5; RNA polymerases catalyse the DNA dependent polymerization of RNA.... - 399.36 3.52E-126 796 - 1231 multi-dom 147266

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
168 Not available 226013 Not available Not available Cre03.g165750.t1.1 AT4G35800.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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