PHATRDRAFT_42494 large low complexity coiled coil protien with large repeat region
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42494 chr_1 large low complexity coiled coil protien with large repeat region 211729 214274 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0174

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0173
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29); This domain is found at the N-terminus of some C1... cl07031 39.5347 0.000299975 219 - 269 specific 254690
Inhibitor_I29 superfamily Cathepsin propeptide inhibitor domain (I29); This domain is found at the N-terminus of some C1... - 37.6087 0.00148182 59 - 121 superfamily 263147
Inhibitor_I29 superfamily Cathepsin propeptide inhibitor domain (I29); This domain is found at the N-terminus of some C1... - 37.6087 0.00148182 59 - 121 superfamily 263147
Glyco_transf_34 superfamily galactosyl transferase GMA12/MNN10 family; This family contains a number of glycosyltransferase... - 39.3662 0.00326498 7 - 80 superfamily 244044

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
4439 Not available 259855 317707 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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