PHATRDRAFT_47430 rna polymerase ii subunit (RNAP_II_RPB11)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47430	chr_13	rna polymerase ii subunit (RNAP_II_RPB11)	605638	606015	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0376

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0171	0.38	4.9 9300

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RNAP_II_RPB11		RPB11 subunit of Eukaryotic RNA polymerase II; The eukaryotic RPB11 subunit of RNA polymerase (RNAP...	cl11409	138.109	8.56E-43	15 - 107	specific	132902
RNAP_RPB11_RPB3 superfamily		RPB11 and RPB3 subunits of RNA polymerase; The eukaryotic RPB11 and RPB3 subunits of RNA polymerase...	-	138.109	8.56E-43	15 - 107	superfamily	264356

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
36330		Not available	231625	305329	252560	Cre13.g565550.t1.2	AT3G52090.1	523164

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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