PHATRDRAFT_48855 nucleolar protein 9 (COG1341)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48855	chr_19	nucleolar protein 9 (COG1341)	486371	489395	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0444

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0006	0.56	780 24000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Fer4_NifH superfamily		The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain....	-	55.1577	5.74E-09	568 - 691	superfamily	266552
SRPBCC superfamily		START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily; SRPBCC domains...	-	40.7703	0.000268754	80 - 179	superfamily	265438
COG1341		Predicted GTPase or GTP-binding protein [General function prediction only]	-	103.249	1.08E-23	567 - 903	multi-dom	224260

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
34412		Not available	154325	164037	Not available	Not available	AT5G11010.3	533258

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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