PHATRDRAFT_50411 pentatricopeptiderepeat-containing protein (PPR_2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50411 chr_29 pentatricopeptiderepeat-containing protein (PPR_2) 289954 291432 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0177

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0253
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PPR_2 PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... cl03252 48.553 1.12E-07 129 - 179 specific 257477
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 48.553 1.12E-07 129 - 179 superfamily 261658
PPR_2 PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... cl03252 48.553 1.12E-07 129 - 179 specific 257477
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 48.553 1.12E-07 129 - 179 superfamily 261658

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
bd1069 Not available 185285 163920 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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