Phatr_hclust_0177 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plot Conditions Plot Dendrogram
GO ID Go Term p-value q-value Cluster
GO:0006779 porphyrin biosynthesis 0.00000000145 0.0000046 Phatr_hclust_0177
GO:0015995 chlorophyll biosynthesis 0.000109405 0.344515 Phatr_hclust_0177
GO:0015979 photosynthesis 0.00021798 0.683369 Phatr_hclust_0177
GO:0030494 bacteriochlorophyll biosynthesis 0.00617436 1 Phatr_hclust_0177
GO:0006725 aromatic compound metabolism 0.00649705 1 Phatr_hclust_0177
GO:0016117 carotenoid biosynthesis 0.0184135 1 Phatr_hclust_0177
GO:0006118 electron transport 0.049437 1 Phatr_hclust_0177
GO:0006457 protein folding 0.161817 1 Phatr_hclust_0177
GO:0009765 photosynthesis light harvesting 0.215486 1 Phatr_hclust_0177
GO:0009058 biosynthesis 0.244396 1 Phatr_hclust_0177
PHATRDRAFT_10640 : chloroplast coproporphyrinogen iii oxidase (PLN02873)
PHATRDRAFT_45238 : uncharacterized conserved protein (SPOUT_MTase superfamily)
PHATRDRAFT_7626 : fkbp-type peptidyl-prolyl cis-trans isomerase (FKBP_C)
PHATRDRAFT_51811 : porphobilinogen deaminase (hemC)
PHATRDRAFT_14808 : nud24_arath nudix hydrolasechloroplast precursor (Nudix_Hydrolase superfamily)
PHATRDRAFT_50411 : pentatricopeptiderepeat-containing protein (PPR_2)
PHATRDRAFT_9210 : cog1233: phytoene dehydrogenase and related proteins (COG1233)
PHATRDRAFT_44529 : (DUF1995 superfamily)
PHATRDRAFT_52655 : glutamate-trna ligase (PLN02627)
PHATRDRAFT_20757 : uroporphyrinogen decarboxylase (URO-D)
PHATRDRAFT_49437 : nad dependent epimerase dehydratase familyexpressed (NADB_Rossmann superfamily)
PHATRDRAFT_13265 : (PLN03069)
PHATRDRAFT_43737 : phytanoyl-dioxygenase (PhyH superfamily)
PHATRDRAFT_8987 : mitochondrial phosphate transport protein (Mito_carr)
PHATRDRAFT_16545 : methionyl-trna synthetase (tRNA_bind_EMAP-II_like)
PHATRDRAFT_45845 : zeaxanthin epoxidase precursor (PRK06847)
PHATRDRAFT_16322 : fucoxanthin chlorophyll a c binding protein (Chloroa_b-bind superfamily)
PHATRDRAFT_36362 : peptidylprolyl isomerase (FKBP_C)
PHATRDRAFT_31109 : plastid protoporphyrinogen oxidase (PLN02576)
PHATRDRAFT_36347 : glutamate-1-semialdehyde aminotransferase (PRK00062)
PHATRDRAFT_15980 : tetrapyrrole-binding protein (GUN4 superfamily)
PHATRDRAFT_31683 : chloroplast geranylgeranyl reductase hydrogenase (PLN00093)
PHATRDRAFT_12807 : chlorophyll synthetase (PT_UbiA_chlorophyll)
PHATRDRAFT_33017 : mg chelatase subunit (Cob-chelat-sub)
PHATRDRAFT_42982 : fg-gap repeat family protein
PHATRDRAFT_22819 : peroxisomal membrane (Mpv17_PMP22)
PHATRDRAFT_15068 : chloroplast coproporphyrinogen iii oxidase (PLN02873)
Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h 0.699 0.000505051
Copper_SH Copper_SH -0.600 0.000515464
Green_vs_Red_24h Green_vs_Red_24h 0.327 0.0075
Silver_SH Silver_SH 0.065 0.424684
Cadmium_1.2mg Cadmium_1.2mg -0.080 0.211429
BlueLight_24h BlueLight_24h -0.278 0.0145833
GreenLight_0.5h GreenLight_0.5h 0.041 0.926989
RedLight_6h RedLight_6h 0.267 0.163559
light_16hr_dark_7.5hr light_16hr_dark_7.5hr -0.000 0.980594
GreenLight_24h GreenLight_24h 0.167 0.18736
light_6hr light_6hr 2.211 0.000561798
dark_8hr_light_3hr dark_8hr_light_3hr 1.888 0.00060241
Blue_vs_Green_6h Blue_vs_Green_6h 0.275 0.00128205
Ammonia_SH Ammonia_SH -0.545 0.0219298
Simazine_SH Simazine_SH -1.375 0.000423729
Oil_SH Oil_SH -0.211 0.0297753
Salinity_15ppt_SH Salinity_15ppt_SH -0.411 0.000609756
Cadmium_SH Cadmium_SH -0.150 0.144595
Blue_vs_Red_24h Blue_vs_Red_24h -0.118 0.364256
highlight_0to6h highlight_0to6h -0.646 0.000806452
BlueLight_0.5h BlueLight_0.5h -2.886 0.000462963
Dispersant_SH Dispersant_SH 0.236 0.0208904
light_16hr_dark_4hr light_16hr_dark_4hr -0.704 0.000943396
light_15.5hr light_15.5hr -1.561 0.000625
light_10.5hr light_10.5hr 0.621 0.00183486
Dispersed_oil_SH Dispersed_oil_SH -0.000 1
Si_free Si_free 0.076 0.480702
Re-illuminated_0.5h Re-illuminated_0.5h -0.951 0.00268456
Mixture_SH Mixture_SH -0.638 0.00789474
Blue_vs_Red_6h Blue_vs_Red_6h 0.393 0.0163793
light_16hr_dark_30min light_16hr_dark_30min -2.445 0.000735294
BlueLight_6h BlueLight_6h 0.660 0.000581395
highlight_12to48h highlight_12to48h 0.613 0.000555556
RedLight_24h RedLight_24h -0.160 0.254873
Dark_treated Dark_treated -4.888 0.000446429
GreenLight_6h GreenLight_6h 0.385 0.00897436
Cadmium_0.12mg Cadmium_0.12mg -0.114 0.00185185
Blue_vs_Green_24h Blue_vs_Green_24h -0.445 0.00135135
RedLight_0.5h RedLight_0.5h -0.639 0.0401198
Green_vs_Red_6h Green_vs_Red_6h 0.118 0.547899
Re-illuminated_24h Re-illuminated_24h -0.038 0.811023
MEME Output