PHATRDRAFT_51092 glutamine synthetase (PLN02284)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_51092	chr_15	glutamine synthetase (PLN02284)	372220	373582	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0218

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0179	0.41	2.8 9.5

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Gln-synt_C superfamily		Glutamine synthetase, catalytic domain; Glutamine synthetase, catalytic domain.	-	255.603	2.65E-82	151 - 396	superfamily	249604
Gln-synt_C superfamily		Glutamine synthetase, catalytic domain; Glutamine synthetase, catalytic domain.	-	255.603	2.65E-82	151 - 396	superfamily	249604
Gln-synt_N superfamily		Glutamine synthetase, beta-Grasp domain; Glutamine synthetase, beta-Grasp domain.	-	73.3165	3.61E-16	61 - 145	superfamily	252271
Gln-synt_N superfamily		Glutamine synthetase, beta-Grasp domain; Glutamine synthetase, beta-Grasp domain.	-	73.3165	3.61E-16	61 - 145	superfamily	252271
PLN02284		glutamine synthetase	-	674.484	0	55 - 402	multi-dom	177922

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
26051		Not available	158325	245279	437187	Cre02.g113200.t1.1	AT5G16570.1	289026

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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