11320 (DPHA1) PLN02291
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11320 chr_19c_29 (DPHA1) PLN02291 28025 29393 + PLN02291

Synonyms

NCBI ID Ensembl Genomes exon ID
7451866 Thaps11320.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0140

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0048
 0.39

Most Highly Correlated Transcripts

6605

hypothetical protein
0.875

bd1801

(bd1801) NA
0.8493

bd738

(bd738) NA
0.8477

29322

AAT_I superfamily
0.8466

8999

hypothetical protein
0.8441

25506

hypothetical protein
0.8337

7335

hypothetical protein
0.8306

6066

APG6
0.8243

11412

hypothetical protein
0.8203

bd1877

(bd1877) NA
0.8199

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02291 phospho-2-dehydro-3-deoxyheptonate aldolase cl03230 903.311 0 1 - 455 specific 177928
DAHP_synth_2 superfamily Class-II DAHP synthetase family; Members of this family are aldolase enzymes that catalyse the... - 903.311 0 1 - 455 superfamily 261651

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_24353 PHATRDRAFT_24353 167448 179565 Not available Cre17.g726750.t1.2 AT4G39980.1 535945

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0003849 GO:0009073 -

GO:0003849

3-deoxy-7-phosphoheptulonate synthase activity

Details: 
Catalysis of the reaction: D-erythrose 4-phosphate + H(2)O + phosphoenolpyruvate = 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate + phosphate.
GO Category: 
MF

GO:0009073

aromatic amino acid family biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
GO Category: 
BP

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