19977 TRX_family
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
19977 chr_5 TRX_family 723816 724841 - TRX_family

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps19977.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0141

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0103
 0.42

Most Highly Correlated Transcripts

22657

hypothetical protein
1

1807

hypothetical protein
0.9336

11214

SOUL
0.9203

5812

hypothetical protein
0.9179

39141

RHOD superfamily
0.9146

6991

hypothetical protein
0.91

26470

(GFS1) PLN02725
0.9095

4020

COG1741
0.909

3345

hypothetical protein
0.9054

263844

(SUOX) SO_family_Moco superfamily
0.9048

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX... cl00388 87.6136 1.06E-21 249 - 338 specific 239245
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 87.6136 1.06E-21 249 - 338 superfamily 260398

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10788 PHATRDRAFT_10788 197598 301045 61580 Not available AT1G76760.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0006118 GO:0004791 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0004791

thioredoxin-disulfide reductase activity

Details: 
Catalysis of the reaction: NADP(+) + thioredoxin = H(+) + NADPH + thioredoxin disulfide.
GO Category: 
MF

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