24295 (RPN2) RPN2
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
24295 chr_11a (RPN2) RPN2 154986 158631 + RPN2
NCBI ID Ensembl Genomes exon ID
7444533 Thaps24295.3, Thaps24295.1, Thaps24295.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0193
Normalized Mean Residue
Thaps_bicluster_0194
0.41
DENN superfamily
0.863
eIF1_SUI1_like superfamily
0.8622
hypothetical protein
0.8585
(RPT4) RPT1
0.8512
NAD_binding_8 superfamily
0.8483
SufI
0.8483
hypothetical protein
0.8483
TroA-like superfamily
0.8474
TIP120 superfamily
0.8464
MATE_like superfamily
0.8451
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover,... - 603.48 0 67 - 1105 multi-dom 227446
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_19300 PHATRDRAFT_19300 279188 63417 458270 Cre17.g727950.t1.1 AT2G32730.1 352502
KEGG description KEGG Pathway
Proteasome map03050
GO:0015992 GO:0016020 GO:0016469 GO:0016820 GO:0006508 GO:0030693 GO:0000074 GO:0004298 GO:0004299 -

proton transport

Details: 
The directed movement of protons (hydrogen ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

proton-transporting two-sector ATPase complex

Details: 
A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible.
GO Category: 
CC

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Details: 
Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane.
GO Category: 
MF

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

threonine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA
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