24735 EMP70
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24735 chr_13 EMP70 960899 963400 + EMP70

Synonyms

NCBI ID Ensembl Genomes exon ID
7450525 Thaps24735.3, Thaps24735.2, Thaps24735.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0173

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0202
 0.30

Most Highly Correlated Transcripts

268610

EMP70 superfamily
0.9447

26212

(COP2) COG5096
0.9051

269663

(COP4) SEC21
0.898

13156

(ACS1) AFD_class_I superfamily
0.8898

36494

NBD_sugar-kinase_HSP70_actin superfamily
0.8896

2328

hypothetical protein
0.8858

269232

EFh
0.8838

264492

Peptidase_C1A
0.8828

261400

NA
0.8803

40868

EMP70 superfamily
0.8782

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EMP70 superfamily Endomembrane protein 70; Endomembrane protein 70. - 547.296 0 47 - 593 superfamily 251662
EMP70 superfamily Endomembrane protein 70; Endomembrane protein 70. - 547.296 0 47 - 593 superfamily 251662

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_22145 PHATRDRAFT_22145 Not available 28376 416312 Cre10.g439850.t1.2 AT3G13772.1 551943

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016021 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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