260761 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
260761 chr_1 HA 225293 227492 - HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7447615 Thaps260761.2, Thaps260761.1, Thaps260761.3, Thaps260761.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0096

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0057
 0.46

Most Highly Correlated Transcripts

5161

hypothetical protein
0.8921

21238

(ALD3) ALDH_F3-13-14_CALDH-like
0.8632

10935

Ion_trans
0.8588

4997

hypothetical protein
0.8531

262863

BAR_SNX
0.8477

10603

DUF563
0.8454

1316

hypothetical protein
0.8437

7846

hypothetical protein
0.8374

268761

hypothetical protein
0.8371

260816

DAGK_acc superfamily
0.8356

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 60.3969 2.10E-11 516 - 580 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 60.3969 2.10E-11 516 - 580 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 60.3969 2.10E-11 516 - 580 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 60.3969 2.10E-11 516 - 580 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 60.3969 2.10E-11 516 - 580 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 60.3969 2.10E-11 516 - 580 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46291 PHATRDRAFT_46291 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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