261242 (PSBP) PsbP superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261242 chr_2 (PSBP) PsbP superfamily 380188 380412 + PsbP superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442234 Thaps261242.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0071

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0174
 0.29

Most Highly Correlated Transcripts

bd1645

(bd1645) tpt
0.9381

bd1306

(bd1306) NA
0.9288

bd718

(bd718) PRK10387
0.9116

bd208

(bd208) DUF3529
0.9081

6759

hypothetical protein
0.9036

bd1403

(bd1403) NA
0.903

bd1380

(bd1380) ycf39
0.9006

bd211

(bd211) Maf_Ham1 superfamily
0.8969

bd1342

(bd1342) psaL
0.8965

bd1161

(bd1161) NA
0.8895

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PsbP superfamily PsbP; This family consists of the 23 kDa subunit of oxygen evolving system of photosystem II or... - 58.461 1.41E-12 1 - 68 superfamily 261702

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48359 PHATRDRAFT_48359 273153 319785 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

Not available -

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