261403 MFS_1Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261403	chr_2	MFS_1	1223679	1225311	+	MFS_1

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444678	Thaps261403.4, Thaps261403.3, Thaps261403.2, Thaps261403.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0466

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0041	0.50

Most Highly Correlated Transcripts

4616 hypothetical protein 0.8386	8288 hypothetical protein 0.8363	23719 hypothetical protein 0.8322	2009 hypothetical protein 0.8288	264206 (RPT1) RPT1 0.8237	23624 SCP superfamily 0.8136
23416 SCP superfamily 0.812	37988 (ARF1) Ras_like_GTPase superfamily 0.808	6931 hypothetical protein 0.8068	8740 hypothetical protein 0.8046

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MFS_1		Major Facilitator Superfamily; Major Facilitator Superfamily.	-	71.682	5.10E-14	74 - 416	multi-dom	254360

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_42677	PHATRDRAFT_42677	189352	323792	Not available	Not available	AT1G64650.1	467901

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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