261608 PLN02585
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261608 chr_2 PLN02585 2569573 2570382 + PLN02585

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps261608.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0224
 0.27

Most Highly Correlated Transcripts

270378

hypothetical protein
1

22194

DUF1995 superfamily
0.9783

268480

(GGPS1) Trans_IPPS_HT
0.972

3974

(UroD2) URO-D
0.9653

3326

TauD
0.9642

3506

DUF1995 superfamily
0.9599

31012

(Cpx1) PLN02873
0.9592

7442

hypothetical protein
0.9575

37615

NADB_Rossmann superfamily
0.957

263658

GUN4
0.9545

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mg-por_mtran_C superfamily Magnesium-protoporphyrin IX methyltransferase C-terminus; This family represents the C-terminus (... - 143.578 6.82E-43 172 - 268 superfamily 115744
Mg-por_mtran_C superfamily Magnesium-protoporphyrin IX methyltransferase C-terminus; This family represents the C-terminus (... - 143.578 6.82E-43 172 - 268 superfamily 115744
PLN02585 magnesium protoporphyrin IX methyltransferase - 464.33 1.67E-165 1 - 269 multi-dom 215319

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_18872 PHATRDRAFT_18872 210312 201844 428887 Cre12.g498550.t1.1 AT4G25080.5 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008757 GO:0015979 GO:0015995 GO:0046406 -

GO:0008757

S-adenosylmethionine-dependent methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
GO Category: 
MF

GO:0015979

photosynthesis

Details: 
The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
GO Category: 
BP

GO:0015995

chlorophyll biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors.
GO Category: 
BP

GO:0046406

magnesium protoporphyrin IX methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine(1+) + magnesium protoporphyrin IX = S-adenosyl-L-homocysteine + H(+) + magnesium protoporphyrin IX 13-monomethyl ester.
GO Category: 
MF

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