262034 allantoicase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262034 chr_4 allantoicase 237627 239124 - allantoicase

Synonyms

NCBI ID Ensembl Genomes exon ID
7442057 Thaps262034.3, Thaps262034.1, Thaps262034.4, Thaps262034.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0031

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0028
 0.44

Most Highly Correlated Transcripts

36669

TPT
0.9201

915

hypothetical protein
0.8766

28125

PLN00203
0.8763

268592

VDE superfamily
0.8762

261400

NA
0.8746

19764

MPC superfamily
0.8688

26991

GRX_GRXh_1_2_like
0.862

9247

hypothetical protein
0.8599

268908

Trans_IPPS_HH
0.8551

263810

PTZ00430
0.8517

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Allantoicase superfamily Allantoicase repeat; This family is found in pairs in Allantoicases, forming the majority of the... - 125.939 1.84E-34 227 - 401 superfamily 252028
Allantoicase superfamily Allantoicase repeat; This family is found in pairs in Allantoicases, forming the majority of the... - 125.939 1.84E-34 227 - 401 superfamily 252028
allantoicase allantoicase; Members of this family are the enzyme allantoicase (EC 3.5.3.4), also called... - 317.339 2.11E-105 5 - 401 multi-dom 234071

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_3787 PHATRDRAFT_3787 140299 318648 459309 Not available Not available 545642

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004037 -

GO:0004037

allantoicase activity

Details: 
Catalysis of the reaction: allantoate + H(2)O = (S)-ureidoglycolate + urea.
GO Category: 
MF

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