268062 PRK14293
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268062 chr_1 PRK14293 1830455 1831642 + PRK14293

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps268062.3, Thaps268062.1, Thaps268062.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0052

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0114
 0.48

Most Highly Correlated Transcripts

268061

hypothetical protein
0.9956

3588

hypothetical protein
0.9312

1888

hypothetical protein
0.9298

511

(GBP1) PRK09601
0.9282

22770

PLN02908
0.9227

105

PTZ00248
0.9089

4524

DHQS
0.9057

20983

DUF760
0.9051

5105

hypothetical protein
0.9032

21710

Pho88 superfamily
0.9025

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DnaJ_C superfamily C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40... - 187.247 9.05E-58 126 - 348 superfamily 199909
DnaJ_C superfamily C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40... - 187.247 9.05E-58 126 - 348 superfamily 199909
DnaJ_zf Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of DnaJ/... cl19048 96.5558 3.86E-25 155 - 219 specific 199908
DnaJ_zf superfamily Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of DnaJ/... - 96.5558 3.86E-25 155 - 219 superfamily 267401
DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play... cl02542 88.7565 2.28E-22 9 - 62 specific 99751
DnaJ superfamily DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play... - 88.7565 2.28E-22 9 - 62 superfamily 261333
PRK14293 chaperone protein DnaJ; Provisional - 463.693 1.30E-162 8 - 375 multi-dom 237663

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13424 PHATRDRAFT_13424 207791 320536 459056 Cre12.g507650.t1.2 AT1G80030.2 260708

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006457 GO:0031072 GO:0051082 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0031072

heat shock protein binding

Details: 
Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
GO Category: 
MF

GO:0051082

unfolded protein binding

Details: 
Interacting selectively and non-covalently with an unfolded protein.
GO Category: 
MF

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