268364 UPF0051Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
268364	chr_2	UPF0051	2074352	2076377	-	UPF0051

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452355	Thaps268364.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0052

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0021	0.47	0.21 12000

Most Highly Correlated Transcripts

268061 hypothetical protein 0.8545	268062 PRK14293 0.8442	bd74 (bd74) T6A_YgjD 0.8413	25560 PseudoU_synth_RluCD_like 0.8393	268271 PRK10867 0.838	4524 DHQS 0.8366
13551 Uup 0.8172	41898 (HSP70_2) HYOU1-like_NBD 0.8165	261407 NAD_binding_8 superfamily 0.809	3186 hypothetical protein 0.8025

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UPF0051		Uncharacterized protein family (UPF0051); Uncharacterized protein family (UPF0051).	cl19515	198.574	3.23E-62	17 - 246	specific	250635
UPF0051 superfamily		Uncharacterized protein family (UPF0051); Uncharacterized protein family (UPF0051).	-	198.574	3.23E-62	17 - 246	superfamily	267868

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_49608	PHATRDRAFT_49608	268455	42468	454654	Cre12.g513950.t1.2	AT1G32500.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005554 -

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