3114 PRX_BCP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3114 chr_3 PRX_BCP 155744 156438 - PRX_BCP

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps3114.2, Thaps3114.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0054

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0247
 0.36

Most Highly Correlated Transcripts

3114

PRX_BCP
1

270228

(Lhcx4) fucoxanthin chlorophyll a/c protein, LI818 clade
0.9092

7513

hypothetical protein
0.8573

21813

hypothetical protein
0.8233

25433

(Lhcr5) fucoxanthin chlorophyll a/c light-harvesting protein
0.8013

23889

(Lhcr9) fucoxanthin chl a/c light-harvesting protein
0.7929

10598

hypothetical protein
0.7893

263487

(Tp_AP2-EREBP12_CCHH20) pathogenesis-related transcription factor
0.7794

270367

hypothetical protein
0.7645

11721

hypothetical protein
0.7375

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRX_BCP Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of... cl00388 133.827 1.40E-39 37 - 178 specific 239315
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 133.827 1.40E-39 37 - 178 superfamily 260398

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_21736 PHATRDRAFT_21736 142891 291365 443238 Cre10.g422300.t1.2 AT3G26060.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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