32577 (ASDH) PLN02383
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32577 chr_3 (ASDH) PLN02383 1431192 1432713 + PLN02383

Synonyms

NCBI ID Ensembl Genomes exon ID
7441943 Thaps32577.3, Thaps32577.2, Thaps32577.4, Thaps32577.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0222

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0191
 0.44

Most Highly Correlated Transcripts

bd1709

(bd1709) NA
0.9399

bd1667

(bd1667) Mpp10
0.9182

268500

PRK05218
0.9023

24550

W2_eIF4G1_like
0.8617

41953

RtcB
0.8489

262625

gatB
0.8461

268807

(RIR1_2) PLN02437
0.8432

4372

hypothetical protein
0.8428

11220

eIF2A
0.8427

3416

TPR
0.8395

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Semialdhyde_dhC Semialdehyde dehydrogenase, dimerization domain; This Pfam entry contains the following members: N-... cl19935 135.519 7.81E-38 207 - 387 specific 251521
Gp_dh_C superfamily Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; GAPDH is a tetrameric NAD-binding... - 135.519 7.81E-38 207 - 387 superfamily 268288
Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain; This Pfam entry contains the following members: N-... cl19130 116.871 1.35E-31 71 - 187 specific 250373
GFO_IDH_MocA superfamily Oxidoreductase family, NAD-binding Rossmann fold; This family of enzymes utilize NADP or NAD. This... - 116.871 1.35E-31 71 - 187 superfamily 267483
PLN02383 aspartate semialdehyde dehydrogenase - 574.025 0 65 - 401 multi-dom 178009

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10757 PHATRDRAFT_10757 190637 179552 454120 Cre09.g389689.t1.1 AT1G14810.1 294733

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005737 GO:0006520 GO:0016620 GO:0051287 GO:0004073 GO:0009086 GO:0009088 -

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

GO:0006520

cellular amino acid metabolic process

Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO Category: 
BP

GO:0016620

oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
GO Category: 
MF

GO:0051287

NAD binding

Details: 
Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
GO Category: 
MF

GO:0004073

aspartate-semialdehyde dehydrogenase activity

Details: 
Catalysis of the reaction: L-aspartate 4-semialdehyde + NADP(+) + phosphate = 4-phospho-L-aspartate + H(+) + NADPH.
GO Category: 
MF

GO:0009086

methionine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.
GO Category: 
BP

GO:0009088

threonine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins.
GO Category: 
BP

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