24550 W2_eIF4G1_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24550 chr_12 W2_eIF4G1_like 867218 870218 - W2_eIF4G1_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7443183 Thaps24550.2, Thaps24550.3, Thaps24550.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0222

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0233
 0.34

Most Highly Correlated Transcripts

268500

PRK05218
0.9238

27873

PLN02274
0.9221

bd1876

(bd1876) NatB_MDM20 superfamily
0.9219

6250

reductase
0.9145

261462

hypothetical protein
0.9118

23106

hypothetical protein
0.9107

25799

TYW3 superfamily
0.908

268807

(RIR1_2) PLN02437
0.8987

39022

COG2319
0.8895

23187

SDA1
0.8879

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
W2_eIF4G1_like C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins;... cl17013 108.911 2.08E-27 695 - 826 specific 211397
W2 superfamily C-terminal domain of eIF4-gamma/eIF5/eIF2b-epsilon; This domain is found at the C-terminus of... - 108.911 2.08E-27 695 - 826 superfamily 266498

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44383 PHATRDRAFT_44383 271354 7602 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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