36099 IscU_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36099 chr_9 IscU_like 193601 194471 + IscU_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7449273 Thaps36099.2, Thaps36099.1, Thaps36099.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0107

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0028
 0.44

Most Highly Correlated Transcripts

bd885

(bd885) NA
0.9072

268217

hypothetical protein
0.8836

bd1840

(bd1840) NA
0.8792

bd1890

(bd1890) NA
0.8734

31845

PLN02428
0.8689

bd1692

(bd1692) NA
0.8552

268124

COG0429
0.8526

18613

S14_ClpP_2
0.8525

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8487

17865

HemeO
0.8485

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
IscU_like Iron-sulfur cluster scaffold-like proteins; IscU_like and NifU_like proteins. IscU and NifU... cl00528 157.796 5.57E-49 72 - 186 specific 143480
IscU_like superfamily Iron-sulfur cluster scaffold-like proteins; IscU_like and NifU_like proteins. IscU and NifU... - 157.796 5.57E-49 72 - 186 superfamily 260479

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_28374 PHATRDRAFT_28374 273064 237702 350992 Cre13.g568850.t1.2 AT4G22220.1 514182

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments