36441 CYCLIN
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36441 chr_10 CYCLIN 274743 277449 - CYCLIN

Synonyms

NCBI ID Ensembl Genomes exon ID
7447031 Thaps36441.3, Thaps36441.2, Thaps36441.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0082

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0292
 0.20

Most Highly Correlated Transcripts

bd439

(bd439) POLBc_alpha
0.9897

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9851

bd950

(bd950) NA
0.9731

bd1214

(bd1214) KISc_C_terminal
0.9694

5867

CDC6
0.9624

4688

hypothetical protein
0.9621

1111

GINS_A_psf3
0.9581

4041

HEC1
0.9491

5263

hypothetical protein
0.9473

23064

hypothetical protein
0.9433

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CYCLIN Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control.... cl00050 62.256 1.22E-11 708 - 816 specific 238003
CYCLIN superfamily Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control.... - 62.256 1.22E-11 708 - 816 superfamily 260157
CYCLIN Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control.... cl00050 62.256 1.22E-11 708 - 816 specific 238003
CYCLIN superfamily Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control.... - 62.256 1.22E-11 708 - 816 superfamily 260157

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_17135 PHATRDRAFT_17135 187415 177866 Not available Not available Not available 543936

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000074 GO:0005634 -

GO:0000074

NA

Details: 
NA
GO Category: 
NA

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

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