4143 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4143 chr_4 hypothetical protein 286871 288111 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7442066 Thaps4143.2, Thaps4143.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0406

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0055
 0.46

Most Highly Correlated Transcripts

3348

hypothetical protein
0.9018

23991

(Tp_HSF_2.5g) HSF_DNA-bind superfamily
0.8918

32971

Tryp_SPc superfamily
0.8895

38707

Aldolase_Class_I superfamily
0.8871

18662

ADK
0.8843

269624

TIM_phosphate_binding superfamily
0.8765

35136

NA
0.8751

264337

hypothetical protein
0.867

27688

Trp-synth-beta_II superfamily
0.8647

36007

Aldolase_II superfamily
0.8606

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_40369 PHATRDRAFT_40369 260579 291917 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003684 GO:0005524 GO:0006298 -

GO:0003684

damaged DNA binding

Details: 
Interacting selectively and non-covalently with damaged DNA.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006298

mismatch repair

Details: 
A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
GO Category: 
BP

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