4947 PP-ATPase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4947 chr_4 PP-ATPase 2357364 2360527 - PP-ATPase

Synonyms

NCBI ID Ensembl Genomes exon ID
7446709 Thaps4947.2, Thaps4947.3, Thaps4947.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0270

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0254
 0.29

Most Highly Correlated Transcripts

bd1876

(bd1876) NatB_MDM20 superfamily
0.945

13308

PLN02948
0.9088

32395

RNA_pol
0.8915

267979

HCO3_cotransp superfamily
0.889

bd96

(bd96) eIF-3_zeta
0.8827

bd1945

(bd1945) NA
0.881

20930

DRE_TIM_metallolyase superfamily
0.8772

bd1709

(bd1709) NA
0.8752

20825

hypothetical protein
0.8717

7450

hypothetical protein
0.8701

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PP-ATPase N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell... cl00292 120.75 9.11E-31 530 - 732 specific 238950
AANH_like superfamily Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases... - 120.75 9.11E-31 530 - 732 superfamily 260331
MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning] - 109.569 5.86E-26 530 - 756 multi-dom 223115

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48395 PHATRDRAFT_48395 239484 146524 201552 Not available Not available 497846

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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