7916 (FCP_2) Chloroa_b-bind superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7916 chr_9 (FCP_2) Chloroa_b-bind superfamily 254739 255703 + Chloroa_b-bind superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449282 Thaps7916.3, Thaps7916.2, Thaps7916.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0022

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0129
 0.19

Most Highly Correlated Transcripts

270222

0.9852

bd218

(bd218) Chloroa_b-bind superfamily
0.9812

270092

Chloroa_b-bind superfamily
0.9633

34276

Chloroa_b-bind
0.963

33606

Chloroa_b-bind superfamily
0.9608

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9567

2356

hypothetical protein
0.9557

6139

Chloroa_b-bind superfamily
0.9499

33131

Chloroa_b-bind
0.9498

4882

(Lhcr4) fucoxanthin chl a/c light-harvesting protein
0.9488

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Chloroa_b-bind superfamily Chlorophyll A-B binding protein; Chlorophyll A-B binding protein. - 117.536 1.83E-32 1 - 202 superfamily 261492

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_34536 PHATRDRAFT_34536 205888 Not available 459601 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009765 GO:0016020 -

GO:0009765

photosynthesis, light harvesting

Details: 
Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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