8498 Ribosomal_L9_N
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
8498 chr_10 Ribosomal_L9_N 739098 739940 + Ribosomal_L9_N
NCBI ID Ensembl Genomes exon ID
7446880 Thaps8498.2, Thaps8498.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0271
GRX_PICOT_like
0.9421
SAICAR_synt_Sc
0.9269
TRX_reduct
0.9205
(RL20) Ribosomal_L20
0.919
HCO3_cotransp superfamily
0.9172
hypothetical protein
0.9131
hypothetical protein
0.9072
Zn-ribbon_RPB9
0.9059
(RPB5) PLN03111
0.9037
COG5133 superfamily
0.9023
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L9_N superfamily Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, N-terminal domain. - 60.9601 5.59E-13 49 - 95 superfamily 250502
Ribosomal_L9_N superfamily Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, N-terminal domain. - 60.9601 5.59E-13 49 - 95 superfamily 250502
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_36420 PHATRDRAFT_36420 262122 253858 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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