93 ELO
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
93 chr_8 ELO 103886 105327 - ELO

Synonyms

NCBI ID Ensembl Genomes exon ID
7443445 Thaps93.2, Thaps93.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0287

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0132
 0.41

Most Highly Correlated Transcripts

bd1515

(bd1515) Adenylsuccinate_lyase_2
0.9144

21723

DnaJ
0.8918

36007

Aldolase_II superfamily
0.8834

22240

eRF1
0.8745

4524

DHQS
0.8734

105

PTZ00248
0.8605

38707

Aldolase_Class_I superfamily
0.8604

37539

cpn10
0.8599

9943

hypothetical protein
0.8579

31929

(GGPS5) Trans_IPPS_HT
0.8576

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ELO GNS1/SUR4 family; Members of this family are involved in long chain fatty acid elongation systems... cl03120 188.644 2.01E-57 49 - 297 specific 250402
ELO superfamily GNS1/SUR4 family; Members of this family are involved in long chain fatty acid elongation systems... - 188.644 2.01E-57 49 - 297 superfamily 261595

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9255 PHATRDRAFT_9255 277401 259222 369674 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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