Phatr_hclust_0018 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0006468 protein amino acid phosphorylation 0.0124819 1 Phatr_hclust_0018
GO:0043087 regulation of GTPase activity 0.032161 1 Phatr_hclust_0018
GO:0006334 nucleosome assembly 0.0464638 1 Phatr_hclust_0018
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota) 0.049301 1 Phatr_hclust_0018
GO:0006512 ubiquitin cycle 0.107123 1 Phatr_hclust_0018
GO:0006464 protein modification 0.171749 1 Phatr_hclust_0018
GO:0006457 protein folding 0.296964 1 Phatr_hclust_0018
GO:0006355 regulation of transcription, DNA-dependent 0.487367 1 Phatr_hclust_0018
GO:0006508 proteolysis and peptidolysis 0.495352 1 Phatr_hclust_0018
GO:0006118 electron transport 0.503223 1 Phatr_hclust_0018

Members

PHATRDRAFT_5608 : mgc52831 protein (UBCc)
PHATRDRAFT_52304 : epsilon frustilin
PHATRDRAFT_47698 : serine threonine protein kinase (PKc)
PHATRDRAFT_50171 :
PHATRDRAFT_46216 :
PHATRDRAFT_49291 : sh2 domain-containing protein (PKc_like superfamily)
PHATRDRAFT_44975 : (Glyco_transf_64 superfamily)
PHATRDRAFT_44629 : lipopolysaccharide a protein (CAP10 superfamily)
PHATRDRAFT_47849 :
PHATRDRAFT_4937 : spore formation protein (AAA)
PHATRDRAFT_45729 :
PHATRDRAFT_47872 : epsilon frustilin
PHATRDRAFT_49085 :
PHATRDRAFT_46945 :
PHATRDRAFT_40891 : muc17 protein (PHA03247)
PHATRDRAFT_49276 :
PHATRDRAFT_35832 : dimethylanaline monooxygenase-like (PLN02172)
PHATRDRAFT_49212 :
PHATRDRAFT_34694 :
PHATRDRAFT_16341 : solute carrier family 35 (UAA)
PHATRDRAFT_49833 : ziga4 (arf gap-like zinc finger-containing protein ziga4) dna binding (ArfGap superfamily)
PHATRDRAFT_49344 :
PHATRDRAFT_48496 : alkaline serine protease (Peptidases_S8_PCSK9_ProteinaseK_like)
PHATRDRAFT_45748 : tkl family protein kinase (S_TKc)
PHATRDRAFT_42434 : aaa-type atpase family protein ankyrin repeat family protein (AAA)
PHATRDRAFT_44578 :
PHATRDRAFT_2593 : (PLN00113)

Conditions

Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h -1.465 0.000505051
Copper_SH Copper_SH 0.620 0.000515464
Green_vs_Red_24h Green_vs_Red_24h -0.301 0.0163043
Silver_SH Silver_SH -0.472 0.000555556
Cadmium_1.2mg Cadmium_1.2mg -0.146 0.0177778
BlueLight_24h BlueLight_24h 0.052 0.853671
GreenLight_0.5h GreenLight_0.5h -0.701 0.0254491
RedLight_6h RedLight_6h -1.000 0.000694444
light_16hr_dark_7.5hr light_16hr_dark_7.5hr 0.000 1
GreenLight_24h GreenLight_24h 0.155 0.260553
light_6hr light_6hr -0.732 0.000561798
dark_8hr_light_3hr dark_8hr_light_3hr -0.898 0.00060241
Blue_vs_Green_6h Blue_vs_Green_6h 0.074 0.448649
Ammonia_SH Ammonia_SH 0.157 0.536028
Simazine_SH Simazine_SH -0.192 0.0818815
Oil_SH Oil_SH 0.509 0.000666667
Salinity_15ppt_SH Salinity_15ppt_SH 0.740 0.000609756
Cadmium_SH Cadmium_SH -0.203 0.056875
Blue_vs_Red_24h Blue_vs_Red_24h -0.404 0.0127451
highlight_0to6h highlight_0to6h -0.032 0.926218
BlueLight_0.5h BlueLight_0.5h -0.474 0.267679
Dispersant_SH Dispersant_SH 0.531 0.000909091
light_16hr_dark_4hr light_16hr_dark_4hr 0.569 0.000943396
light_15.5hr light_15.5hr 0.593 0.00575221
light_10.5hr light_10.5hr 0.197 0.437156
Dispersed_oil_SH Dispersed_oil_SH 0.604 0.000675676
Si_free Si_free -0.106 0.375159
Re-illuminated_0.5h Re-illuminated_0.5h -0.228 0.611141
Mixture_SH Mixture_SH -0.026 0.938071
Blue_vs_Red_6h Blue_vs_Red_6h 0.156 0.402956
light_16hr_dark_30min light_16hr_dark_30min 0.695 0.000735294
BlueLight_6h BlueLight_6h -0.843 0.000581395
highlight_12to48h highlight_12to48h 0.339 0.0396825
RedLight_24h RedLight_24h 0.456 0.0025
Dark_treated Dark_treated -1.312 0.00548387
GreenLight_6h GreenLight_6h -0.917 0.000609756
Cadmium_0.12mg Cadmium_0.12mg -0.150 0.00185185
Blue_vs_Green_24h Blue_vs_Green_24h -0.103 0.136441
RedLight_0.5h RedLight_0.5h -0.904 0.00524194
Green_vs_Red_6h Green_vs_Red_6h 0.083 0.71734
Re-illuminated_24h Re-illuminated_24h 0.442 0.000657895

Motifs

MEME Output