Phatr_hclust_0145 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plot Conditions Plot Dendrogram
GO ID Go Term p-value q-value Cluster
GO:0006886 intracellular protein transport 0.112459 1 Phatr_hclust_0145
GO:0006511 ubiquitin-dependent protein catabolism 0.125669 1 Phatr_hclust_0145
GO:0006396 RNA processing 0.1541 1 Phatr_hclust_0145
GO:0006412 protein biosynthesis 0.385887 1 Phatr_hclust_0145
GO:0006118 electron transport 0.503223 1 Phatr_hclust_0145
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c 0.00296369 1 Phatr_hclust_0145
GO:0006120 mitochondrial electron transport, NADH to ubiquinone 0.00886694 1 Phatr_hclust_0145
GO:0006508 proteolysis and peptidolysis 0.0253471 1 Phatr_hclust_0145
GO:0006260 DNA replication 0.0744898 1 Phatr_hclust_0145
GO:0000074 regulation of cell cycle 0.0963646 1 Phatr_hclust_0145
PHATRDRAFT_46133 : ubiquinol-cytochrome c reductase complex 14 kda (UCR_14kD superfamily)
PHATRDRAFT_33400 : (dsDNA_bind superfamily)
PHATRDRAFT_9701 : rna binding motifx-linked 2 (RRM_ist3_like)
PHATRDRAFT_17332 : band 7 protein (SPFH_paraslipin)
PHATRDRAFT_20787 : af297643_1mitochondrial processing peptidase beta subunit (PqqL)
PHATRDRAFT_43730 : polymerase (dna directed)epsilon 3 (p17 subunit) (H4 superfamily)
PHATRDRAFT_10284 : ribosomal large subunit pseudouridine synthase a (RluA)
PHATRDRAFT_7961 : bromodomain containing 9 (Bromodomain)
PHATRDRAFT_46040 : rhodanese domain protein (TST_Repeat_2)
PHATRDRAFT_30977 : cell division cycle 37 homolog (CDC37_C)
PHATRDRAFT_43401 : tipd_dicdi protein tipd (WD40)
PHATRDRAFT_15884 : s-adenosyl-methyltransferase (AdoMet_MTases superfamily)
PHATRDRAFT_22919 : nduv2_caeel probable nadh dehydrogenaseflavoproteinmitochondrial precursor (2Fe-2S_thioredx)
PHATRDRAFT_50732 : replication factor c (activator 1) 3 (rfc)
PHATRDRAFT_21135 : heat shock protein (PRK05456)
PHATRDRAFT_47384 : rna helicase (PTZ00424)
PHATRDRAFT_40044 : astacin-like protein (PLN00052)
PHATRDRAFT_54642 : cell division cycle proteinexpressed (CDC48)
PHATRDRAFT_45284 : clathrin coat assembly like protein (AP-4_Mu4_Cterm)
PHATRDRAFT_50604 : cell surface flocculin
Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h -0.812 0.000505051
Copper_SH Copper_SH 0.191 0.0261261
Green_vs_Red_24h Green_vs_Red_24h 0.171 0.0878505
Silver_SH Silver_SH 0.052 0.522816
Cadmium_1.2mg Cadmium_1.2mg 0.072 0.231915
BlueLight_24h BlueLight_24h -0.326 0.00128205
GreenLight_0.5h GreenLight_0.5h -0.995 0.000458716
RedLight_6h RedLight_6h -0.863 0.000694444
light_16hr_dark_7.5hr light_16hr_dark_7.5hr 0.000 1
GreenLight_24h GreenLight_24h -0.433 0.000961538
light_6hr light_6hr -0.166 0.402522
dark_8hr_light_3hr dark_8hr_light_3hr -0.037 0.862192
Blue_vs_Green_6h Blue_vs_Green_6h 0.092 0.255556
Ammonia_SH Ammonia_SH -0.281 0.207328
Simazine_SH Simazine_SH -0.010 0.923829
Oil_SH Oil_SH -0.223 0.0141304
Salinity_15ppt_SH Salinity_15ppt_SH 0.055 0.555621
Cadmium_SH Cadmium_SH -0.019 0.847374
Blue_vs_Red_24h Blue_vs_Red_24h 0.278 0.0345588
highlight_0to6h highlight_0to6h 0.206 0.0424603
BlueLight_0.5h BlueLight_0.5h -1.063 0.00338346
Dispersant_SH Dispersant_SH -0.165 0.0669082
light_16hr_dark_4hr light_16hr_dark_4hr 0.098 0.328239
light_15.5hr light_15.5hr 0.177 0.404899
light_10.5hr light_10.5hr -0.123 0.603867
Dispersed_oil_SH Dispersed_oil_SH -0.245 0.0107143
Si_free Si_free -0.077 0.457971
Re-illuminated_0.5h Re-illuminated_0.5h -0.932 0.00206897
Mixture_SH Mixture_SH -0.263 0.274309
Blue_vs_Red_6h Blue_vs_Red_6h -0.113 0.54375
light_16hr_dark_30min light_16hr_dark_30min 0.214 0.293542
BlueLight_6h BlueLight_6h -0.976 0.000581395
highlight_12to48h highlight_12to48h 0.352 0.0138158
RedLight_24h RedLight_24h -0.604 0.000943396
Dark_treated Dark_treated -0.943 0.031746
GreenLight_6h GreenLight_6h -1.068 0.000609756
Cadmium_0.12mg Cadmium_0.12mg 0.057 0.065534
Blue_vs_Green_24h Blue_vs_Green_24h 0.107 0.0892473
RedLight_0.5h RedLight_0.5h -1.120 0.000555556
Green_vs_Red_6h Green_vs_Red_6h -0.205 0.183835
Re-illuminated_24h Re-illuminated_24h -0.414 0.000657895
MEME Output