| COG0275 | Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis |
| COG0329 | Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
| COG0357 | Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
| COG0381 | UDP-N-acetylglucosamine 2-epimerase |
| COG0399 | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
| COG0438 | Glycosyltransferase |
| COG0449 | Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
| COG0451 | Nucleoside-diphosphate-sugar epimerases |
| COG0463 | Glycosyltransferases involved in cell wall biogenesis |
| COG0472 | UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
| COG0481 | Membrane GTPase LepA |
| COG0510 | Predicted choline kinase involved in LPS biosynthesis |
| COG0562 | UDP-galactopyranose mutase |
| COG0597 | Lipoprotein signal peptidase |
| COG0615 | Cytidylyltransferase |
| COG0668 | Small-conductance mechanosensitive channel |
| COG0677 | UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
| COG0682 | Prolipoprotein diacylglyceryltransferase |
| COG0702 | Predicted nucleoside-diphosphate-sugar epimerases |
| COG0707 | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
| COG0729 | Outer membrane protein |
| COG0739 | Membrane proteins related to metalloendopeptidases |
| COG0741 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
| COG0744 | Membrane carboxypeptidase (penicillin-binding protein) |
| COG0750 | Predicted membrane-associated Zn-dependent proteases 1 |
| COG0761 | Penicillin tolerance protein |
| COG0763 | Lipid A disaccharide synthetase |
| COG0766 | UDP-N-acetylglucosamine enolpyruvyl transferase |
| COG0768 | Cell division protein FtsI/penicillin-binding protein 2 |
| COG0769 | UDP-N-acetylmuramyl tripeptide synthase |
| COG0770 | UDP-N-acetylmuramyl pentapeptide synthase |
| COG0771 | UDP-N-acetylmuramoylalanine-D-glutamate ligase |
| COG0773 | UDP-N-acetylmuramate-alanine ligase |
| COG0774 | UDP-3-O-acyl-N-acetylglucosamine deacetylase |
| COG0787 | Alanine racemase |
| COG0791 | Cell wall-associated hydrolases (invasion-associated proteins) |
| COG0793 | Periplasmic protease |
| COG0794 | Predicted sugar phosphate isomerase involved in capsule formation |
| COG0796 | Glutamate racemase |
| COG0797 | Lipoproteins |
| COG0810 | Periplasmic protein TonB, links inner and outer membranes |
| COG0812 | UDP-N-acetylmuramate dehydrogenase |
| COG0815 | Apolipoprotein N-acyltransferase |
| COG0818 | Diacylglycerol kinase |
| COG0836 | Mannose-1-phosphate guanylyltransferase |
| COG0845 | Membrane-fusion protein |
| COG0859 | ADP-heptose:LPS heptosyltransferase |
| COG0860 | N-acetylmuramoyl-L-alanine amidase |
| COG1004 | Predicted UDP-glucose 6-dehydrogenase |
| COG1043 | Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
| COG1044 | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
| COG1083 | CMP-N-acetylneuraminic acid synthetase |
| COG1086 | Predicted nucleoside-diphosphate sugar epimerases |
| COG1087 | UDP-glucose 4-epimerase |
| COG1088 | dTDP-D-glucose 4,6-dehydratase |
| COG1089 | GDP-D-mannose dehydratase |
| COG1091 | dTDP-4-dehydrorhamnose reductase |
| COG1134 | ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
| COG1181 | D-alanine-D-alanine ligase and related ATP-grasp enzymes |
| COG1207 | N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) |
| COG1208 | Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
| COG1209 | dTDP-glucose pyrophosphorylase |
| COG1210 | UDP-glucose pyrophosphorylase |
| COG1212 | CMP-2-keto-3-deoxyoctulosonic acid synthetase |
| COG1213 | Predicted sugar nucleotidyltransferases |
| COG1215 | Glycosyltransferases, probably involved in cell wall biogenesis |
| COG1247 | Sortase and related acyltransferases |
| COG1292 | Choline-glycine betaine transporter |
| COG1346 | Putative effector of murein hydrolase |
| COG1361 | S-layer domain |
| COG1368 | Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
| COG1388 | FOG: LysM repeat |
| COG1442 | Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
| COG1452 | Organic solvent tolerance protein OstA |
| COG1462 | Uncharacterized protein involved in formation of curli polymers |
| COG1519 | 3-deoxy-D-manno-octulosonic-acid transferase |
| COG1538 | Outer membrane protein |
| COG1560 | Lauroyl/myristoyl acyltransferase |
| COG1589 | Cell division septal protein |
| COG1596 | Periplasmic protein involved in polysaccharide export |
| COG1663 | Tetraacyldisaccharide-1-P 4'-kinase |
| COG1664 | Integral membrane protein CcmA involved in cell shape determination |
| COG1682 | ABC-type polysaccharide/polyol phosphate export systems, permease component |
| COG1686 | D-alanyl-D-alanine carboxypeptidase |
| COG1696 | Predicted membrane protein involved in D-alanine export |
| COG1732 | Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
| COG1792 | Cell shape-determining protein |
| COG1794 | Aspartate racemase |
| COG1807 | 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
| COG1861 | Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog |
| COG1876 | D-alanyl-D-alanine carboxypeptidase |
| COG1887 | Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
| COG1898 | dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
| COG1922 | Teichoic acid biosynthesis proteins |
| COG1970 | Large-conductance mechanosensitive channel |
| COG2027 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
| COG2088 | Uncharacterized protein, involved in the regulation of septum location |
| COG2089 | Sialic acid synthase |
| COG2148 | Sugar transferases involved in lipopolysaccharide synthesis |
| COG2173 | D-alanyl-D-alanine dipeptidase |
| COG2222 | Predicted phosphosugar isomerases |
| COG2230 | Cyclopropane fatty acid synthase and related methyltransferases |
| COG2247 | Putative cell wall-binding domain |
| COG2335 | Secreted and surface protein containing fasciclin-like repeats |
| COG2821 | Membrane-bound lytic murein transglycosylase |
| COG2825 | Outer membrane protein |
| COG2829 | Outer membrane phospholipase A |
| COG2834 | Outer membrane lipoprotein-sorting protein |
| COG2843 | Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) |
| COG2853 | Surface lipoprotein |
| COG2870 | ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
| COG2877 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
| COG2885 | Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
| COG2891 | Cell shape-determining protein |
| COG2943 | Membrane glycosyltransferase |
| COG2951 | Membrane-bound lytic murein transglycosylase B |
| COG2980 | Rare lipoprotein B |
| COG2982 | Uncharacterized protein involved in outer membrane biogenesis |
| COG3015 | Uncharacterized lipoprotein NlpE involved in copper resistance |
| COG3017 | Outer membrane lipoprotein involved in outer membrane biogenesis |
| COG3040 | Bacterial lipocalin |
| COG3047 | Outer membrane protein W |
| COG3049 | Penicillin V acylase and related amidases |
| COG3056 | Uncharacterized lipoprotein |
| COG3061 | Cell envelope opacity-associated protein A |
| COG3064 | Membrane protein involved in colicin uptake |
| COG3065 | Starvation-inducible outer membrane lipoprotein |
| COG3133 | Outer membrane lipoprotein |
| COG3137 | Putative salt-induced outer membrane protein |
| COG3203 | Outer membrane protein (porin) |
| COG3206 | Uncharacterized protein involved in exopolysaccharide biosynthesis |
| COG3209 | Rhs family protein |
| COG3248 | Nucleoside-binding outer membrane protein |
| COG3264 | Small-conductance mechanosensitive channel |
| COG3306 | Glycosyltransferase involved in LPS biosynthesis |
| COG3307 | Lipid A core - O-antigen ligase and related enzymes |
| COG3317 | Uncharacterized lipoprotein |
| COG3409 | Putative peptidoglycan-binding domain-containing protein |
| COG3468 | Type V secretory pathway, adhesin AidA |
| COG3475 | LPS biosynthesis protein |
| COG3511 | Phospholipase C |
| COG3524 | Capsule polysaccharide export protein |
| COG3559 | Putative exporter of polyketide antibiotics |
| COG3562 | Capsule polysaccharide export protein |
| COG3563 | Capsule polysaccharide export protein |
| COG3637 | Opacity protein and related surface antigens |
| COG3659 | Carbohydrate-selective porin |
| COG3660 | Predicted nucleoside-diphosphate-sugar epimerase |
| COG3713 | Outer membrane protein V |
| COG3754 | Lipopolysaccharide biosynthesis protein |
| COG3757 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
| COG3764 | Sortase (surface protein transpeptidase) |
| COG3765 | Chain length determinant protein |
| COG3770 | Murein endopeptidase |
| COG3773 | Cell wall hydrolyses involved in spore germination |
| COG3774 | Mannosyltransferase OCH1 and related enzymes |
| COG3944 | Capsular polysaccharide biosynthesis protein |
| COG3951 | Rod binding protein |
| COG3955 | Exopolysaccharide biosynthesis protein |
| COG3966 | Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
| COG3967 | Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
| COG3980 | Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase |
| COG4092 | Predicted glycosyltransferase involved in capsule biosynthesis |
| COG4238 | Murein lipoprotein |
| COG4464 | Capsular polysaccharide biosynthesis protein |
| COG4520 | Surface antigen |
| COG4571 | Outer membrane protease |
| COG4591 | ABC-type transport system, involved in lipoprotein release, permease component |
| COG4623 | Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
| COG4750 | CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes |
| COG4775 | Outer membrane protein/protective antigen OMA87 |
| COG4932 | Predicted outer membrane protein |
| COG4948 | L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
| COG4952 | Predicted sugar isomerase |
| COG4953 | Membrane carboxypeptidase/penicillin-binding protein PbpC |
| COG5009 | Membrane carboxypeptidase/penicillin-binding protein |
| COG5039 | Exopolysaccharide biosynthesis protein |
| COG5337 | Spore coat assembly protein |
| COG5386 | Cell surface protein |
| COG5434 | Endopolygalacturonase |
| COG5479 | Uncharacterized protein potentially involved in peptidoglycan biosynthesis |
| COG5498 | Predicted glycosyl hydrolase |
| COG5520 | O-Glycosyl hydrolase |
| COG5577 | Spore coat protein |
| COG5581 | Predicted glycosyltransferase |
| COG5597 | Alpha-N-acetylglucosamine transferase |
| COG5632 | N-acetylmuramoyl-L-alanine amidase |
| COG5653 | Protein involved in cellulose biosynthesis (CelD) |
