PITA_207 megaCluster: 11 Residual: 0.28 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
PITA_207	11	0.28	15	0	0.863437	0

Members

Displaying 1 - 18 of 18

12236 budding uninhibited by benzimidazoles 1 homolog, beta (S. cerevisiae) Details for RP23-204G5.1 - budding uninhibited by benzimidazoles 1 homolog, beta (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12236 Tuberculist Genomic Region	12316 asp (abnormal spindle)-like, microcephaly associated (Drosophila) Details for AC158946.1 - asp (abnormal spindle)-like, microcephaly associated (Drosophila) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12316 Tuberculist Genomic Region
13631 eukaryotic elongation factor-2 kinase Details for - - eukaryotic elongation factor-2 kinase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13631 Tuberculist Genomic Region	17215 minichromosome maintenance deficient 3 (S. cerevisiae) Details for - - minichromosome maintenance deficient 3 (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17215 Tuberculist Genomic Region
17220 minichromosome maintenance deficient 7 (S. cerevisiae) Details for - - minichromosome maintenance deficient 7 (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17220 Tuberculist Genomic Region	17685 mutS homolog 2 (E. coli) Details for - - mutS homolog 2 (E. coli) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17685 Tuberculist Genomic Region
20503 solute carrier family 16 (monocarboxylic acid transporters), member 7 Details for - - solute carrier family 16 (monocarboxylic acid transporters), member 7 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20503 Tuberculist Genomic Region	20877 aurora kinase B Details for RP23-19I2.1 - aurora kinase B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20877 Tuberculist Genomic Region
246102 rotatin Details for - - rotatin GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 246102 Tuberculist Genomic Region	268697 cyclin B1 Details for - - cyclin B1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 268697 Tuberculist Genomic Region
54124 CDC28 protein kinase 1b Details for - - CDC28 protein kinase 1b GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 54124 Tuberculist Genomic Region	67041 3-oxoacid CoA transferase 1 Details for - - 3-oxoacid CoA transferase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67041 Tuberculist Genomic Region
67629 SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) Details for - - SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67629 Tuberculist Genomic Region	68090 Yip1 interacting factor homolog A (S. cerevisiae) Details for - - Yip1 interacting factor homolog A (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68090 Tuberculist Genomic Region
68585 reticulon 4 Details for RP23-176O5.4 - reticulon 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68585 Tuberculist Genomic Region	72512 transmembrane protein 173 Details for - - transmembrane protein 173 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72512 Tuberculist Genomic Region
77782 polymerase (DNA directed), theta Details for - - polymerase (DNA directed), theta GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 77782 Tuberculist Genomic Region	80986 cytoskeleton associated protein 2 Details for - - cytoskeleton associated protein 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 80986 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
V_ZFP281_01_M01597	1	0

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.00000000021	AAAAAANAAAAA	V$ZFP105_03_M02827, Zfp105.1	150	KAGCCAATGAKN	NFYA_MA0060.1, V$ALPHACP1_01_M00687, V$NFYA_Q5_M02106, V$NFY_01_M00287, V$NFY_Q6_M00185, V$CAAT_01_M00254, V$NFYC_Q5_M02107, V$NFY_Q6_01_M00775, V$IPF1_02_M01234, V$NFY_C_M00209

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.17	CGAACG	NA	1.5	CGCGGGTT	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.63	GGTACA	NA	NA	1.07	ATGGTACA	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

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