PITA_52 megaCluster: 8 Residual: 0.23

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_52 8 0.23 15 0 0.897236 0
Displaying 1 - 48 of 48
11883 arylsulfatase A

Details for - - arylsulfatase A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11883

Tuberculist Genomic Region

15182 histone deacetylase 2

Details for - - histone deacetylase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15182

Tuberculist Genomic Region

17347 MAP kinase-interacting serine/threonine kinase 2

Details for - - MAP kinase-interacting serine/threonine kinase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17347

Tuberculist Genomic Region

216805 folliculin

Details for RP23-180B18.1 - folliculin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216805

Tuberculist Genomic Region

218138 GDP-mannose 4, 6-dehydratase

Details for RP23-459H16.3 - GDP-mannose 4, 6-dehydratase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 218138

Tuberculist Genomic Region

21855 translocase of inner mitochondrial membrane 17b

Details for RP23-198C2.2 - translocase of inner mitochondrial membrane 17b

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21855

Tuberculist Genomic Region

225160 THO complex 1

Details for - - THO complex 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 225160

Tuberculist Genomic Region

227298 family with sequence similarity 134, member A

Details for - - family with sequence similarity 134, member A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227298

Tuberculist Genomic Region

237082 nuclear transport factor 2-like export factor 2

Details for RP23-161L11.3 - nuclear transport factor 2-like export factor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 237082

Tuberculist Genomic Region

241490 RNA binding motif protein 45

Details for RP23-211L7.2 - RNA binding motif protein 45

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 241490

Tuberculist Genomic Region

52705 KRR1, small subunit (SSU) processome component, homolog (yeast)

Details for - - KRR1, small subunit (SSU) processome component, homolog (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52705

Tuberculist Genomic Region

52715 coiled-coil domain containing 43

Details for RP23-57F11.7 - coiled-coil domain containing 43

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52715

Tuberculist Genomic Region

53332 myotubularin related protein 1

Details for RP23-125F4.1 - myotubularin related protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 53332

Tuberculist Genomic Region

56484 forkhead box O3

Details for - - forkhead box O3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56484

Tuberculist Genomic Region

65113 Nedd4 family interacting protein 1

Details for - - Nedd4 family interacting protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 65113

Tuberculist Genomic Region

66880 arginine/serine-rich coiled-coil 1

Details for - - arginine/serine-rich coiled-coil 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66880

Tuberculist Genomic Region

67089 proteasome (prosome, macropain) 26S subunit, ATPase, 6

Details for - - proteasome (prosome, macropain) 26S subunit, ATPase, 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67089

Tuberculist Genomic Region

67242 gem (nuclear organelle) associated protein 6

Details for - - gem (nuclear organelle) associated protein 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67242

Tuberculist Genomic Region

67493 methyltransferase like 16

Details for RP23-174M12.2 - methyltransferase like 16

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67493

Tuberculist Genomic Region

72772 RAD50 interactor 1

Details for - - RAD50 interactor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72772

Tuberculist Genomic Region

74159 acyl-Coenzyme A binding domain containing 5

Details for RP23-280K4.2 - acyl-Coenzyme A binding domain containing 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74159

Tuberculist Genomic Region

75739 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)

Details for - - membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75739

Tuberculist Genomic Region

78935 serum amyloid A-like 1

Details for - - serum amyloid A-like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78935

Tuberculist Genomic Region

97541 glutaminyl-tRNA synthetase

Details for - - glutaminyl-tRNA synthetase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 97541

Tuberculist Genomic Region

99167 synovial sarcoma, X breakpoint 2 interacting protein

Details for - - synovial sarcoma, X breakpoint 2 interacting protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 99167

Tuberculist Genomic Region

13018 CCCTC-binding factor

Details for - - CCCTC-binding factor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13018

Tuberculist Genomic Region

17184 matrin 3

Details for - - matrin 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17184

Tuberculist Genomic Region

209354 eukaryotic translation initiation factor 2B, subunit 1 (alpha)

Details for - - eukaryotic translation initiation factor 2B, subunit 1 (alpha)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 209354

Tuberculist Genomic Region

70804 progesterone receptor membrane component 2

Details for - - progesterone receptor membrane component 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70804

Tuberculist Genomic Region

75614 RAB26, member RAS oncogene family, opposite strand

Details for - - RAB26, member RAS oncogene family, opposite strand

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75614

Tuberculist Genomic Region

14227 FK506 binding protein 2

Details for - - FK506 binding protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14227

Tuberculist Genomic Region

14375 X-ray repair complementing defective repair in Chinese hamster cells 6

Details for - - X-ray repair complementing defective repair in Chinese hamster cells 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14375

Tuberculist Genomic Region

19355 RAD1 homolog (S. pombe)

Details for - - RAD1 homolog (S. pombe)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19355

Tuberculist Genomic Region

20822 TROVE domain family, member 2

Details for AL592403.2 - TROVE domain family, member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20822

Tuberculist Genomic Region

224111 UBX domain protein 7

Details for - - UBX domain protein 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 224111

Tuberculist Genomic Region

234865 nucleoporin 133

Details for - - nucleoporin 133

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 234865

Tuberculist Genomic Region

23938 mitogen-activated protein kinase kinase 5

Details for - - mitogen-activated protein kinase kinase 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 23938

Tuberculist Genomic Region

26385 G protein-coupled receptor kinase 6

Details for - - G protein-coupled receptor kinase 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26385

Tuberculist Genomic Region

270198 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4

Details for - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 270198

Tuberculist Genomic Region

272396 threonyl-tRNA synthetase-like 2

Details for - - threonyl-tRNA synthetase-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 272396

Tuberculist Genomic Region

52469 cytochrome C oxidase assembly factor 3

Details for RP23-281C18.10-001 - cytochrome C oxidase assembly factor 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52469

Tuberculist Genomic Region

74326 heterogeneous nuclear ribonucleoprotein R

Details for RP24-315O23.1 - heterogeneous nuclear ribonucleoprotein R

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74326

Tuberculist Genomic Region

74610 ATP-binding cassette, sub-family B (MDR/TAP), member 8

Details for - - ATP-binding cassette, sub-family B (MDR/TAP), member 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74610

Tuberculist Genomic Region

80743 vacuolar protein sorting 16 (yeast)

Details for RP23-29K12.8 - vacuolar protein sorting 16 (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80743

Tuberculist Genomic Region

66841 electron transferring flavoprotein, dehydrogenase

Details for - - electron transferring flavoprotein, dehydrogenase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66841

Tuberculist Genomic Region

17939 N-acetyl galactosaminidase, alpha

Details for - - N-acetyl galactosaminidase, alpha

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17939

Tuberculist Genomic Region

235339 dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)

Details for - - dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235339

Tuberculist Genomic Region

68877 MAF1 homolog (S. cerevisiae)

Details for - - MAF1 homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68877

Tuberculist Genomic Region

TFs percTargets pValue
V_MAZ_Q6_M00649 0.957447 0.000000632
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.44 CGACGC NA 1.33 CGCCANCG Smad3.1
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.46 CNNAACTA NA NA NA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
NA
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