TargetScan_112 megaCluster: 10 Residual: 0.23

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_112 10 0.23 13 0 0.838249 0
Displaying 1 - 50 of 50
100503003 predicted gene, 17484

Details for - - predicted gene, 17484

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503003

Tuberculist Genomic Region

108907 nucleolar and spindle associated protein 1

Details for RP23-22A15.4 - nucleolar and spindle associated protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108907

Tuberculist Genomic Region

114863 proline synthetase co-transcribed

Details for - - proline synthetase co-transcribed

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 114863

Tuberculist Genomic Region

11690 arachidonate 5-lipoxygenase activating protein

Details for - - arachidonate 5-lipoxygenase activating protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11690

Tuberculist Genomic Region

11772 adaptor-related protein complex 2, alpha 2 subunit

Details for - - adaptor-related protein complex 2, alpha 2 subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11772

Tuberculist Genomic Region

11992 AU RNA binding protein/enoyl-coenzyme A hydratase

Details for - - AU RNA binding protein/enoyl-coenzyme A hydratase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11992

Tuberculist Genomic Region

12428 cyclin A2

Details for - - cyclin A2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12428

Tuberculist Genomic Region

12534 cyclin-dependent kinase 1

Details for - - cyclin-dependent kinase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12534

Tuberculist Genomic Region

17345 antigen identified by monoclonal antibody Ki 67

Details for - - antigen identified by monoclonal antibody Ki 67

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17345

Tuberculist Genomic Region

19387 RAN GTPase activating protein 1

Details for - - RAN GTPase activating protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19387

Tuberculist Genomic Region

20849 signal transducer and activator of transcription 4

Details for - - signal transducer and activator of transcription 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20849

Tuberculist Genomic Region

226414 aspartyl-tRNA synthetase

Details for - - aspartyl-tRNA synthetase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226414

Tuberculist Genomic Region

228026 pyruvate dehydrogenase kinase, isoenzyme 1

Details for RP23-5K9.5 - pyruvate dehydrogenase kinase, isoenzyme 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 228026

Tuberculist Genomic Region

236930 excision repair cross-complementing rodent repair deficiency complementation group 6 like

Details for RP23-448C18.8 - excision repair cross-complementing rodent repair deficiency complementation group 6 like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 236930

Tuberculist Genomic Region

270906 proline rich 11

Details for RP23-352L3.4 - proline rich 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 270906

Tuberculist Genomic Region

30045 DnaJ (Hsp40) homolog, subfamily C, member 12

Details for - - DnaJ (Hsp40) homolog, subfamily C, member 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 30045

Tuberculist Genomic Region

329416 nitric oxide synthase trafficker

Details for RP23-431D4.2 - nitric oxide synthase trafficker

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 329416

Tuberculist Genomic Region

52538 acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)

Details for - - acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52538

Tuberculist Genomic Region

56224 tetraspanin 5

Details for - - tetraspanin 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56224

Tuberculist Genomic Region

58801 phorbol-12-myristate-13-acetate-induced protein 1

Details for - - phorbol-12-myristate-13-acetate-induced protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 58801

Tuberculist Genomic Region

66200 COMM domain containing 6

Details for - - COMM domain containing 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66200

Tuberculist Genomic Region

67241 structural maintenance of chromosomes 6

Details for - - structural maintenance of chromosomes 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67241

Tuberculist Genomic Region

67618 aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase

Details for - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67618

Tuberculist Genomic Region

68612 ubiquitin-conjugating enzyme E2C

Details for RP23-370H21.6 - ubiquitin-conjugating enzyme E2C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68612

Tuberculist Genomic Region

68743 anillin, actin binding protein

Details for - - anillin, actin binding protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68743

Tuberculist Genomic Region

73710 tubulin, beta 2B class IIB

Details for - - tubulin, beta 2B class IIB

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 73710

Tuberculist Genomic Region

94275 melanoma antigen, family D, 1

Details for RP23-272D10.5 - melanoma antigen, family D, 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 94275

Tuberculist Genomic Region

104444 REX2, RNA exonuclease 2 homolog (S. cerevisiae)

Details for - - REX2, RNA exonuclease 2 homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 104444

Tuberculist Genomic Region

232910 adaptor-related protein complex 2, sigma 1 subunit

Details for - - adaptor-related protein complex 2, sigma 1 subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 232910

Tuberculist Genomic Region

66821 BCS1-like (yeast)

Details for - - BCS1-like (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66821

Tuberculist Genomic Region

68618 RIKEN cDNA 1110012L19 gene

Details for RP23-403O11.1 - RIKEN cDNA 1110012L19 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68618

Tuberculist Genomic Region

74016 PHD finger protein 19

Details for RP23-9N11.3 - PHD finger protein 19

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74016

Tuberculist Genomic Region

76594 DnaJ (Hsp40) homolog, subfamily C, member 18

Details for - - DnaJ (Hsp40) homolog, subfamily C, member 18

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76594

Tuberculist Genomic Region

11727 angiogenin, ribonuclease, RNase A family, 5

Details for - - angiogenin, ribonuclease, RNase A family, 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11727

Tuberculist Genomic Region

12235 budding uninhibited by benzimidazoles 1 homolog (S. cerevisiae)

Details for RP23-189N15.7 - budding uninhibited by benzimidazoles 1 homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12235

Tuberculist Genomic Region

14235 forkhead box M1

Details for - - forkhead box M1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14235

Tuberculist Genomic Region

170439 ELOVL family member 6, elongation of long chain fatty acids (yeast)

Details for - - ELOVL family member 6, elongation of long chain fatty acids (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 170439

Tuberculist Genomic Region

217216 cDNA sequence BC030867

Details for RP23-461C4.3 - cDNA sequence BC030867

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217216

Tuberculist Genomic Region

217653 MIS18 binding protein 1

Details for - - MIS18 binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217653

Tuberculist Genomic Region

228482 Rho GTPase activating protein 11A

Details for RP23-288M21.5 - Rho GTPase activating protein 11A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 228482

Tuberculist Genomic Region

26926 apoptosis-inducing factor, mitochondrion-associated 1

Details for RP23-35N5.1 - apoptosis-inducing factor, mitochondrion-associated 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26926

Tuberculist Genomic Region

328186 predicted gene 10336

Details for - - predicted gene 10336

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 328186

Tuberculist Genomic Region

68549 shugoshin-like 2 (S. pombe)

Details for - - shugoshin-like 2 (S. pombe)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68549

Tuberculist Genomic Region

71988 establishment of cohesion 1 homolog 2 (S. cerevisiae)

Details for - - establishment of cohesion 1 homolog 2 (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71988

Tuberculist Genomic Region

72155 centromere protein N

Details for - - centromere protein N

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72155

Tuberculist Genomic Region

76117 Rho GTPase activating protein 15

Details for RP23-211K16.1 - Rho GTPase activating protein 15

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76117

Tuberculist Genomic Region

76464 cancer susceptibility candidate 5

Details for RP23-15I21.2 - cancer susceptibility candidate 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76464

Tuberculist Genomic Region

18968 polymerase (DNA directed), alpha 1

Details for RP23-53K18.2 - polymerase (DNA directed), alpha 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18968

Tuberculist Genomic Region

218973 WD repeat and HMG-box DNA binding protein 1

Details for - - WD repeat and HMG-box DNA binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 218973

Tuberculist Genomic Region

72787 NDC1 transmembrane nucleoporin

Details for RP23-392J14.4 - NDC1 transmembrane nucleoporin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72787

Tuberculist Genomic Region

TFs percTargets pValue
Mtf1.1 0.1875 0.00000366
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
2.1e-17 AAARAAAAAAWA NA 0.0065 YTGAAAGRAAAA NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.09 CCGACG NA 1.24 ACCGMCGC NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.44 TAGGTT NA NA 0.47 CAGTCAAA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
NA
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