TargetScan_123 megaCluster: 10 Residual: 0.25

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_123 10 0.25 9 0 0.638923 0.986
Displaying 1 - 52 of 52
114128 lysosomal-associated protein transmembrane 4B

Details for - - lysosomal-associated protein transmembrane 4B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 114128

Tuberculist Genomic Region

13204 DEAH (Asp-Glu-Ala-His) box polypeptide 15

Details for - - DEAH (Asp-Glu-Ala-His) box polypeptide 15

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13204

Tuberculist Genomic Region

15216 hemochromatosis

Details for RP23-480B19.9 - hemochromatosis

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15216

Tuberculist Genomic Region

19128 protein S (alpha)

Details for - - protein S (alpha)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19128

Tuberculist Genomic Region

19684 radixin

Details for - - radixin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19684

Tuberculist Genomic Region

217340 ring finger protein 157

Details for RP23-184G6.4 - ring finger protein 157

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217340

Tuberculist Genomic Region

230908 TAR DNA binding protein

Details for RP23-331P21.5 - TAR DNA binding protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230908

Tuberculist Genomic Region

381680 neurexophilin and PC-esterase domain family, member 5

Details for - - neurexophilin and PC-esterase domain family, member 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 381680

Tuberculist Genomic Region

54138 ataxin 10

Details for - - ataxin 10

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54138

Tuberculist Genomic Region

56786 TMEM9 domain family, member B

Details for - - TMEM9 domain family, member B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56786

Tuberculist Genomic Region

59013 heterogeneous nuclear ribonucleoprotein H1

Details for RP23-121P11.1 - heterogeneous nuclear ribonucleoprotein H1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 59013

Tuberculist Genomic Region

619883 predicted gene 6109

Details for - - predicted gene 6109

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 619883

Tuberculist Genomic Region

637515 NLR family, pyrin domain containing 1B

Details for DN-72H10.1 - NLR family, pyrin domain containing 1B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 637515

Tuberculist Genomic Region

67486 polymerase (RNA) III (DNA directed) polypeptide G

Details for - - polymerase (RNA) III (DNA directed) polypeptide G

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67486

Tuberculist Genomic Region

68137 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1

Details for - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68137

Tuberculist Genomic Region

68161 RIKEN cDNA A930005H10 gene

Details for - - RIKEN cDNA A930005H10 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68161

Tuberculist Genomic Region

72117 N(alpha)-acetyltransferase 50, NatE catalytic subunit

Details for - - N(alpha)-acetyltransferase 50, NatE catalytic subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72117

Tuberculist Genomic Region

74754 24-dehydrocholesterol reductase

Details for RP23-97O7.9 - 24-dehydrocholesterol reductase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74754

Tuberculist Genomic Region

74760 RAB3A interacting protein (rabin3)-like 1

Details for - - RAB3A interacting protein (rabin3)-like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74760

Tuberculist Genomic Region

78670 pleckstrin homology domain containing, family J member 1

Details for - - pleckstrin homology domain containing, family J member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78670

Tuberculist Genomic Region

107271 acireductone dioxygenase 1

Details for - - acireductone dioxygenase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 104923

Tuberculist Genomic Region

107566 tyrosyl-tRNA synthetase

Details for - - tyrosyl-tRNA synthetase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107271

Tuberculist Genomic Region

108037 ADP-ribosylation factor-like 2 binding protein

Details for - - ADP-ribosylation factor-like 2 binding protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107566

Tuberculist Genomic Region

108961 serine hydroxymethyltransferase 2 (mitochondrial)

Details for - - serine hydroxymethyltransferase 2 (mitochondrial)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108037

Tuberculist Genomic Region

14768 E2F transcription factor 8

Details for - - E2F transcription factor 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108961

Tuberculist Genomic Region

16010 LanC (bacterial lantibiotic synthetase component C)-like 1

Details for AC133187.1 - LanC (bacterial lantibiotic synthetase component C)-like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14768

Tuberculist Genomic Region

16985 insulin-like growth factor binding protein 4

Details for RP23-333D2.6 - insulin-like growth factor binding protein 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16010

Tuberculist Genomic Region

17184 lymphocyte specific 1

Details for AL603651.4 - lymphocyte specific 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16985

Tuberculist Genomic Region

17345 matrin 3

Details for - - matrin 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17184

Tuberculist Genomic Region

20088 antigen identified by monoclonal antibody Ki 67

Details for - - antigen identified by monoclonal antibody Ki 67

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17345

Tuberculist Genomic Region

213002 ribosomal protein S24

Details for - - ribosomal protein S24

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20088

Tuberculist Genomic Region

217303 interferon induced transmembrane protein 6

Details for - - interferon induced transmembrane protein 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 213002

Tuberculist Genomic Region

22630 CD300A antigen

Details for RP23-254J18.3 - CD300A antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217303

Tuberculist Genomic Region

268930 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide

Details for - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22630

Tuberculist Genomic Region

330812 protein kinase, membrane associated tyrosine/threonine 1

Details for - - protein kinase, membrane associated tyrosine/threonine 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 268930

Tuberculist Genomic Region

56421 ring finger protein 150

Details for - - ring finger protein 150

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 330812

Tuberculist Genomic Region

66200 phosphofructokinase, platelet

Details for - - phosphofructokinase, platelet

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56421

Tuberculist Genomic Region

67618 COMM domain containing 6

Details for - - COMM domain containing 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66200

Tuberculist Genomic Region

67705 aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase

Details for - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67618

Tuberculist Genomic Region

72544 RIKEN cDNA 1810058I24 gene

Details for - - RIKEN cDNA 1810058I24 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67705

Tuberculist Genomic Region

74149 exosome component 6

Details for - - exosome component 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72544

Tuberculist Genomic Region

75565 zinc finger protein 946

Details for - - zinc finger protein 946

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74149

Tuberculist Genomic Region

102141 coiled-coil domain containing 101

Details for - - coiled-coil domain containing 101

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75565

Tuberculist Genomic Region

109689 sorting nexin 25

Details for - - sorting nexin 25

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 102141

Tuberculist Genomic Region

15107 arrestin, beta 1

Details for - - arrestin, beta 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 109689

Tuberculist Genomic Region

26451 hydroxyacyl-Coenzyme A dehydrogenase

Details for - - hydroxyacyl-Coenzyme A dehydrogenase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15107

Tuberculist Genomic Region

320209 ribosomal protein L27A

Details for - - ribosomal protein L27A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26451

Tuberculist Genomic Region

65964 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11

Details for - - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320209

Tuberculist Genomic Region

68135 sterile alpha motif and leucine zipper containing kinase AZK

Details for RP23-146F24.1 - sterile alpha motif and leucine zipper containing kinase AZK

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 65964

Tuberculist Genomic Region

13860 eukaryotic translation initiation factor 3, subunit H

Details for - - eukaryotic translation initiation factor 3, subunit H

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68135

Tuberculist Genomic Region

17001 epidermal growth factor receptor pathway substrate 8

Details for - - epidermal growth factor receptor pathway substrate 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13860

Tuberculist Genomic Region

Details for RP23-319B15.7 - leukotriene C4 synthase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17001

Tuberculist Genomic Region

TFs percTargets pValue
SP3_C2H2_DBD_monomeric_11_1 0.959184 0.00000182
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.000000000031 TTTTTTNTTTTT NA 0.0000002 GGGGGCGGGGC SP1_MA0079.2, Klf4_MA0039.2, SP1_MA0079.1, V$SP4_Q5_M01273, V$SP1_Q6_M00196, V$SP1_Q6_01_M00931, V$SP1_Q2_01_M00933, V$SP1_Q4_01_M00932, V$ZFP281_01_M01597, V$GC_01_M00255, V$UF1H3BETA_Q6_M01068, V$SP1_02_M01303, V$KLF7_03_M02773, V$SP1_03_M02281, V$GKLF_02_M01588, V$SP4_03_M02810, V$MAZR_01_M00491, V$EGR1_Q6_M01873, V$ZFP281_04_M02831, V$CKROX_Q2_M01175, V$EGR1_06_M02744, V$SP1_01_M00008, V$SP2_01_M01783, V$ZBP89_Q4_M01816, V$KROX_Q6_M00982, V$CACD_01_M01113, V$ZNF219_01_M01122, V$MAZ_Q6_M00649, V$SP1SP3_Q4_M01219, V$MAZ_Q6_01_M02023, V$E2F3_Q6_M02089, V$WT1_Q6_01_M02036, V$BCL6B_04_M02844, V$SMAD4_04_M02898, V$ETF_Q6_M00695, V$ZFP740_03_M02834, V$EGR_Q6_M00807, V$EKLF_Q5_M01874, V$KLF15_Q2_M01714, V$CACBINDINGPROTEIN_Q6_M00720, V$ZFP410_04_M02936, V$WT1_Q6_M01118, V$NGFIC_01_M00244, V$EGR1_02_M01972, V$RNF96_01_M01199, V$CACCCBINDINGFACTOR_Q6_M00721, V$FKLF_Q5_M01837, Klf7.1, Sp4.1, Zfp281.2, Egr1.1, Bcl6b.2, Smad3.1, Zfp740.1, Zfp410.1, Zif268.1, Sp4.2, Ascl2.2, KLF16_C2H2_DBD_monomeric_11_1, SP4_C2H2_full_monomeric_17_1, SP1_C2H2_DBD_monomeric_11_1, SP3_C2H2_DBD_monomeric_11_1, SP8_C2H2_DBD_monomeric_12_1, KLF14_C2H2_DBD_monomeric_14_1, KLF13_C2H2_full_monomeric_18_1, ZNF740_C2H2_full_monomeric_10_1, Klf12_C2H2_DBD_monomeric_15_1, Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1, Zfp740_C2H2_DBD_monomeric_10_1, EGR2_C2H2_full_monomeric_15_1
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.04 CGCGGT NA 1.03 TCTCGCGC NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.44 ACGCGA NA NA 0.48 GCTTCNTA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
NA
Log in or register to post comments