TargetScan_156 megaCluster: 1 Residual: 0.15 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
TargetScan_156	1	0.15	15	0	0.956789	0

Members

Displaying 1 - 18 of 18

16180 interleukin 1 receptor accessory protein Details for - - interleukin 1 receptor accessory protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16180 Tuberculist Genomic Region	17872 protein phosphatase 1, regulatory (inhibitor) subunit 15A Details for - - protein phosphatase 1, regulatory (inhibitor) subunit 15A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17872 Tuberculist Genomic Region
208266 DOT1-like, histone H3 methyltransferase (S. cerevisiae) Details for - - DOT1-like, histone H3 methyltransferase (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 208266 Tuberculist Genomic Region	217069 tripartite motif-containing 25 Details for RP23-176J13.7 - tripartite motif-containing 25 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 217069 Tuberculist Genomic Region
230738 zinc finger CCCH type containing 12A Details for RP23-325M14.9 - zinc finger CCCH type containing 12A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 230738 Tuberculist Genomic Region	60406 sin3 associated polypeptide Details for - - sin3 associated polypeptide GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 60406 Tuberculist Genomic Region
12703 suppressor of cytokine signaling 1 Details for - - suppressor of cytokine signaling 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12703 Tuberculist Genomic Region	16491 potassium voltage-gated channel, shaker-related subfamily, member 3 Details for - - potassium voltage-gated channel, shaker-related subfamily, member 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16491 Tuberculist Genomic Region
16656 human immunodeficiency virus type I enhancer binding protein 3 Details for RP23-98J9.1 - human immunodeficiency virus type I enhancer binding protein 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16656 Tuberculist Genomic Region	17909 myosin X Details for - - myosin X GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17909 Tuberculist Genomic Region
192656 receptor (TNFRSF)-interacting serine-threonine kinase 2 Details for RP23-378L22.1 - receptor (TNFRSF)-interacting serine-threonine kinase 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 192656 Tuberculist Genomic Region	216799 NLR family, pyrin domain containing 3 Details for RP23-210M6.4 - NLR family, pyrin domain containing 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 216799 Tuberculist Genomic Region
216850 KDM1 lysine (K)-specific demethylase 6B Details for RP23-5O23.5 - KDM1 lysine (K)-specific demethylase 6B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 216850 Tuberculist Genomic Region	219140 spermatogenesis associated 13 Details for - - spermatogenesis associated 13 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 219140 Tuberculist Genomic Region
23921 SH2B adaptor protein 2 Details for - - SH2B adaptor protein 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 23921 Tuberculist Genomic Region	24088 toll-like receptor 2 Details for - - toll-like receptor 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 24088 Tuberculist Genomic Region
320790 chromodomain helicase DNA binding protein 7 Details for RP23-464N23.1 - chromodomain helicase DNA binding protein 7 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 320790 Tuberculist Genomic Region	71409 formin-like 2 Details for RP23-282A22.1 - formin-like 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 71409 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
V_ZBP89_Q4_M01816, Bcl6b.2, V_SP1_Q6_01_M00931, SP1_MA0079.2, V_SP1_03_M02281, V_GKLF_02_M01588, V_SP1_02_M01303, V_GC_01_M00255, V_UF1H3BETA_Q6_M01068, V_KROX_Q6_M00982, V_SP1_Q6_M00196, V_SP4_Q5_M01273, V_ZFP281_01_M01597, V_SP1_Q2_01_M00933, V_SP1_Q4_01_M00932	1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1	0

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
430	ARRNAAAAAMAA	NA	12000	AGGGAGGWGGA	NA

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.44	GCGCGN	V$ZFP161_04_M02933, V$E2F_03_M00516, V$E2F_Q6_01_M00920, V$E2F1_Q3_01_M00938, Zfp161.2, E2F2.1, E2F3.1, Zfp161.1	1.63	CCGCGCGN	E2F2.1, Zfp161.2, E2F3.1, Zfp161.1

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
1.06	TATGNGGG	NA	NA		NA	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

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