TargetScan_207 megaCluster: 1 Residual: 0.14

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_207 1 0.14 15 0.003 0.963808 0

Members

Displaying 1 - 25 of 25
100504215 predicted gene, 20115

Details for - - predicted gene, 20115

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504215

Tuberculist Genomic Region

100504699 RIKEN cDNA 9030425P06 gene

Details for - - RIKEN cDNA 9030425P06 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504699

Tuberculist Genomic Region

109361 RIKEN cDNA D730005E14 gene

Details for - - RIKEN cDNA D730005E14 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 109361

Tuberculist Genomic Region

12349 carbonic anhydrase 2

Details for - - carbonic anhydrase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12349

Tuberculist Genomic Region

12702 suppressor of cytokine signaling 3

Details for RP23-268N22.6 - suppressor of cytokine signaling 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12702

Tuberculist Genomic Region

14571 glycerol phosphate dehydrogenase 2, mitochondrial

Details for - - glycerol phosphate dehydrogenase 2, mitochondrial

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14571

Tuberculist Genomic Region

14579 GTP binding protein (gene overexpressed in skeletal muscle)

Details for RP23-54P14.1 - GTP binding protein (gene overexpressed in skeletal muscle)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14579

Tuberculist Genomic Region

16176 interleukin 1 beta

Details for RP23-384K11.2 - interleukin 1 beta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16176

Tuberculist Genomic Region

16452 Janus kinase 2

Details for - - Janus kinase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16452

Tuberculist Genomic Region

17858 myxovirus (influenza virus) resistance 2

Details for - - myxovirus (influenza virus) resistance 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17858

Tuberculist Genomic Region

18035 nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha

Details for - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18035

Tuberculist Genomic Region

18550 furin (paired basic amino acid cleaving enzyme)

Details for - - furin (paired basic amino acid cleaving enzyme)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18550

Tuberculist Genomic Region

207728 phosphodiesterase 2A, cGMP-stimulated

Details for - - phosphodiesterase 2A, cGMP-stimulated

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 207728

Tuberculist Genomic Region

208266 DOT1-like, histone H3 methyltransferase (S. cerevisiae)

Details for - - DOT1-like, histone H3 methyltransferase (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 208266

Tuberculist Genomic Region

209086 sterile alpha motif domain containing 9-like

Details for - - sterile alpha motif domain containing 9-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 209086

Tuberculist Genomic Region

29810 BCL2-associated athanogene 3

Details for MNCb-2243 - BCL2-associated athanogene 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 29810

Tuberculist Genomic Region

347722 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1

Details for - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 347722

Tuberculist Genomic Region

387173 microRNA 155

Details for - - microRNA 155

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 387173

Tuberculist Genomic Region

407821 zinc and ring finger 3

Details for RP23-293J16.2 - zinc and ring finger 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 407821

Tuberculist Genomic Region

54199 chemokine (C-C motif) receptor-like 2

Details for - - chemokine (C-C motif) receptor-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54199

Tuberculist Genomic Region

60406 sin3 associated polypeptide

Details for - - sin3 associated polypeptide

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 60406

Tuberculist Genomic Region

66665 Myb/SANT-like DNA-binding domain containing 3

Details for RP23-320C6.1 - Myb/SANT-like DNA-binding domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66665

Tuberculist Genomic Region

74732 syntaxin 11

Details for - - syntaxin 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74732

Tuberculist Genomic Region

75767 RAB11 family interacting protein 1 (class I)

Details for - - RAB11 family interacting protein 1 (class I)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75767

Tuberculist Genomic Region

229898 guanylate binding protein 5

Details for - - guanylate binding protein 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 229898

Tuberculist Genomic Region

TFBS DB TF

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
3 ANMAARAGAAA NA 18 KGGAWGCNGAGS NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.1 CGNCGC NA 1.33 CGCGNCGC NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.59 GGTCGC NA NA 0.86 GACCCCGT NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
mmu-miR-551b 0.210526 0.0000128

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