TargetScan_3 megaCluster: 6 Residual: 0.25

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
TargetScan_3	6	0.25	15	0	0.887145	0

Members

Displaying 1 - 69 of 69

TFBS DB TF

TFs	percTargets	pValue
V_MUSCLE_INI_B_M00321	0.925373	0.00000842

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
8.7e-22	AAANAAARAAAA	NA	0.00009	NRGCYCCGCCCC	Klf4_MA0039.2, SP1_MA0079.2, SP1_MA0079.1, V$GC_01_M00255, V$SP1_Q6_M00196, V$SP1_Q4_01_M00932, V$SP1_Q6_01_M00931, V$SP4_Q5_M01273, V$KLF7_03_M02773, V$SP4_03_M02810, V$SP1_Q2_01_M00933, V$GKLF_02_M01588, V$SP1_02_M01303, V$SMAD4_04_M02898, V$SP2_01_M01783, V$EGR1_06_M02744, V$KROX_Q6_M00982, V$SP1_01_M00008, V$MAZR_01_M00491, V$SP1_03_M02281, V$EGR1_Q6_M01873, V$UF1H3BETA_Q6_M01068, V$E2F3_Q6_M02089, V$CKROX_Q2_M01175, V$ZFP281_04_M02831, V$BCL6B_04_M02844, V$CACD_01_M01113, V$ZBP89_Q4_M01816, V$ZFP281_01_M01597, V$ZFP740_03_M02834, V$SP4_04_M02914, V$KLF7_04_M02877, V$ZFP410_04_M02936, V$MAZ_Q6_M00649, V$WT1_Q6_01_M02036, V$EGR_Q6_M00807, V$ETF_Q6_M00695, V$ZNF219_01_M01122, V$FKLF_Q5_M01837, V$MAZ_Q6_01_M02023, Klf7.1, Sp4.1, Egr1.1, Smad3.1, Bcl6b.2, Zfp281.2, Zfp740.1, Sp4.2, Zif268.1, Klf7.2, Zfp410.1, Ascl2.2, SP4_C2H2_full_monomeric_17_1, KLF14_C2H2_DBD_monomeric_14_1, KLF13_C2H2_full_monomeric_18_1, SP1_C2H2_DBD_monomeric_11_1, KLF16_C2H2_DBD_monomeric_11_1, SP3_C2H2_DBD_monomeric_11_1, SP8_C2H2_DBD_monomeric_12_1, Klf12_C2H2_DBD_monomeric_15_1, Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.09	CGCGTC	NA	1.14	CCTNCGCG	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.38	AATTGC	NA	NA	0.39	TGTCTANN	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

12766 thioredoxin domain containing 5 Details for - - thioredoxin domain containing 5 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 105245 Tuberculist Genomic Region	13382 adenylate kinase 1 Details for RP23-17P12.3 - adenylate kinase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 11636 Tuberculist Genomic Region
14132 chemokine (C-X-C motif) receptor 3 Details for RP23-49C8.4 - chemokine (C-X-C motif) receptor 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12766 Tuberculist Genomic Region	14148 dihydrolipoamide dehydrogenase Details for - - dihydrolipoamide dehydrogenase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13382 Tuberculist Genomic Region
15312 Fc receptor, IgG, alpha chain transporter Details for - - Fc receptor, IgG, alpha chain transporter GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14132 Tuberculist Genomic Region	16480 ferredoxin 1 Details for - - ferredoxin 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14148 Tuberculist Genomic Region
16985 high mobility group nucleosomal binding domain 1 Details for - - high mobility group nucleosomal binding domain 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 15312 Tuberculist Genomic Region	19038 junction plakoglobin Details for RP23-392I3.6 - junction plakoglobin GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16480 Tuberculist Genomic Region
20384 lymphocyte specific 1 Details for AL603651.4 - lymphocyte specific 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16985 Tuberculist Genomic Region	20479 peptidylprolyl isomerase C Details for - - peptidylprolyl isomerase C GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19038 Tuberculist Genomic Region
20775 serine/arginine-rich splicing factor 5 Details for - - serine/arginine-rich splicing factor 5 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20384 Tuberculist Genomic Region	225160 vacuolar protein sorting 4b (yeast) Details for - - vacuolar protein sorting 4b (yeast) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20479 Tuberculist Genomic Region
381045 squalene epoxidase Details for - - squalene epoxidase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20775 Tuberculist Genomic Region	387139 THO complex 1 Details for - - THO complex 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 225160 Tuberculist Genomic Region
50797 coiled-coil domain containing 58 Details for - - coiled-coil domain containing 58 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 381045 Tuberculist Genomic Region	52120 microRNA 20a Details for - - microRNA 20a GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 387139 Tuberculist Genomic Region
56442 coatomer protein complex, subunit beta 2 (beta prime) Details for - - coatomer protein complex, subunit beta 2 (beta prime) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 50797 Tuberculist Genomic Region	64934 heparan-alpha-glucosaminide N-acetyltransferase Details for - - heparan-alpha-glucosaminide N-acetyltransferase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 52120 Tuberculist Genomic Region
66663 serine incorporator 1 Details for - - serine incorporator 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56442 Tuberculist Genomic Region	67117 pescadillo homolog 1, containing BRCT domain (zebrafish) Details for RP23-81P12.1 - pescadillo homolog 1, containing BRCT domain (zebrafish) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 64934 Tuberculist Genomic Region
67222 ubiquitin-like modifier activating enzyme 5 Details for - - ubiquitin-like modifier activating enzyme 5 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66663 Tuberculist Genomic Region	68099 dynein light chain Tctex-type 3 Details for RP23-256J17.2 - dynein light chain Tctex-type 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67117 Tuberculist Genomic Region
69019 serum response factor binding protein 1 Details for - - serum response factor binding protein 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67222 Tuberculist Genomic Region	69747 family with sequence similarity 92, member A Details for RP24-215D6.5 - family with sequence similarity 92, member A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68099 Tuberculist Genomic Region
74108 signal peptidase complex subunit 1 homolog (S. cerevisiae) Details for - - signal peptidase complex subunit 1 homolog (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 69019 Tuberculist Genomic Region	74467 zinc finger SWIM-type containing 7 Details for RP23-330N10.3 - zinc finger SWIM-type containing 7 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 69747 Tuberculist Genomic Region
75616 poly(A)-specific ribonuclease (deadenylation nuclease) Details for - - poly(A)-specific ribonuclease (deadenylation nuclease) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74108 Tuberculist Genomic Region	77604 pseudouridylate synthase 10 Details for RP23-164N15.2 - pseudouridylate synthase 10 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74467 Tuberculist Genomic Region
80515 small integral membrane protein 15 Details for - - small integral membrane protein 15 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 75616 Tuberculist Genomic Region	83493 RNA binding motif protein 12 B2 Details for RP23-203A12.6 - RNA binding motif protein 12 B2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 77604 Tuberculist Genomic Region
114641 chromodomain helicase DNA binding protein 3, opposite strand Details for MNCb-2875 - chromodomain helicase DNA binding protein 3, opposite strand GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 80515 Tuberculist Genomic Region	12469 SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae) Details for - - SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 83493 Tuberculist Genomic Region
12747 ribosomal protein L31 Details for - - ribosomal protein L31 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 114641 Tuberculist Genomic Region	14423 chaperonin containing Tcp1, subunit 8 (theta) Details for - - chaperonin containing Tcp1, subunit 8 (theta) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12469 Tuberculist Genomic Region
16553 CDC-like kinase 1 Details for - - CDC-like kinase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12747 Tuberculist Genomic Region	17001 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 Details for - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14423 Tuberculist Genomic Region
18472 kinesin family member 13A Details for - - kinesin family member 13A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16553 Tuberculist Genomic Region	18518 leukotriene C4 synthase Details for RP23-319B15.7 - leukotriene C4 synthase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17001 Tuberculist Genomic Region
20916 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 Details for RP23-194P5.2 - platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18472 Tuberculist Genomic Region	21780 immunoglobulin (CD79A) binding protein 1 Details for - - immunoglobulin (CD79A) binding protein 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18518 Tuberculist Genomic Region
22027 succinate-Coenzyme A ligase, ADP-forming, beta subunit Details for - - succinate-Coenzyme A ligase, ADP-forming, beta subunit GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20916 Tuberculist Genomic Region	227929 transcription factor A, mitochondrial Details for - - transcription factor A, mitochondrial GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 21780 Tuberculist Genomic Region
230908 heat shock protein 90, beta (Grp94), member 1 Details for - - heat shock protein 90, beta (Grp94), member 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 22027 Tuberculist Genomic Region	50875 cytohesin 1 interacting protein Details for RP23-255J22.4 - cytohesin 1 interacting protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 227929 Tuberculist Genomic Region
50911 TAR DNA binding protein Details for RP23-331P21.5 - TAR DNA binding protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 230908 Tuberculist Genomic Region	53945 tropomodulin 3 Details for - - tropomodulin 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 50875 Tuberculist Genomic Region
54405 exosome component 9 Details for - - exosome component 9 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 50911 Tuberculist Genomic Region	59013 solute carrier family 40 (iron-regulated transporter), member 1 Details for - - solute carrier family 40 (iron-regulated transporter), member 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 53945 Tuberculist Genomic Region
63959 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 Details for RP23-43O20.5 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 54405 Tuberculist Genomic Region	66469 heterogeneous nuclear ribonucleoprotein H1 Details for RP23-121P11.1 - heterogeneous nuclear ribonucleoprotein H1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 59013 Tuberculist Genomic Region
66599 solute carrier family 29 (nucleoside transporters), member 1 Details for - - solute carrier family 29 (nucleoside transporters), member 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 63959 Tuberculist Genomic Region	66818 family with sequence similarity 213, member B Details for RP23-15L19.6 - family with sequence similarity 213, member B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66469 Tuberculist Genomic Region
66861 RAD52 motif 1 Details for RP23-382C19.5 - RAD52 motif 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66599 Tuberculist Genomic Region	66877 small integral membrane protein 7 Details for - - small integral membrane protein 7 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66818 Tuberculist Genomic Region
67864 DnaJ (Hsp40) homolog, subfamily C, member 10 Details for RP23-282M14.2 - DnaJ (Hsp40) homolog, subfamily C, member 10 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66861 Tuberculist Genomic Region	68263 Crn, crooked neck-like 1 (Drosophila) Details for RP23-125A1.4 - Crn, crooked neck-like 1 (Drosophila) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66877 Tuberculist Genomic Region
68776 Yip1 domain family, member 4 Details for - - Yip1 domain family, member 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67864 Tuberculist Genomic Region	68879 pyruvate dehydrogenase (lipoamide) beta Details for - - pyruvate dehydrogenase (lipoamide) beta GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68263 Tuberculist Genomic Region
70536 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor Details for RP24-258K7.3 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68776 Tuberculist Genomic Region	72391 PRP6 pre-mRNA splicing factor 6 homolog (yeast) Details for RP23-138J20.4 - PRP6 pre-mRNA splicing factor 6 homolog (yeast) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68879 Tuberculist Genomic Region
72657 glutaminyl-peptide cyclotransferase (glutaminyl cyclase) Details for - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70536 Tuberculist Genomic Region	74197 cyclin-dependent kinase inhibitor 3 Details for - - cyclin-dependent kinase inhibitor 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72391 Tuberculist Genomic Region
76915 RIKEN cDNA 2700094K13 gene Details for - - RIKEN cDNA 2700094K13 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72657 Tuberculist Genomic Region	76936 general transcription factor II E, polypeptide 1 (alpha subunit) Details for - - general transcription factor II E, polypeptide 1 (alpha subunit) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74197 Tuberculist Genomic Region
80286 meiotic nuclear divisions 1 homolog (S. cerevisiae) Details for - - meiotic nuclear divisions 1 homolog (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 76915 Tuberculist Genomic Region	83410 heterogeneous nuclear ribonucleoprotein M Details for RP24-225N8.1 - heterogeneous nuclear ribonucleoprotein M GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 76936 Tuberculist Genomic Region
99730 tumor suppressor candidate 3 Details for - - tumor suppressor candidate 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 80286 Tuberculist Genomic Region	Details for - - cleavage stimulation factor, 3' pre-RNA subunit 2, tau GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 83410 Tuberculist Genomic Region
Details for RP23-128G10.3 - TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 99730 Tuberculist Genomic Region

TargetScan_3 megaCluster: 6 Residual: 0.25

Summary

Members

Details for - - thioredoxin domain containing 5

Details for RP23-17P12.3 - adenylate kinase 1

Details for RP23-49C8.4 - chemokine (C-X-C motif) receptor 3

Details for - - dihydrolipoamide dehydrogenase

Details for - - Fc receptor, IgG, alpha chain transporter

Details for - - ferredoxin 1

Details for - - high mobility group nucleosomal binding domain 1

Details for RP23-392I3.6 - junction plakoglobin

Details for AL603651.4 - lymphocyte specific 1

Details for - - peptidylprolyl isomerase C

Details for - - serine/arginine-rich splicing factor 5

Details for - - vacuolar protein sorting 4b (yeast)

Details for - - squalene epoxidase

Details for - - THO complex 1

Details for - - coiled-coil domain containing 58

Details for - - microRNA 20a

Details for - - coatomer protein complex, subunit beta 2 (beta prime)

Details for - - heparan-alpha-glucosaminide N-acetyltransferase

Details for - - serine incorporator 1

Details for RP23-81P12.1 - pescadillo homolog 1, containing BRCT domain (zebrafish)

Details for - - ubiquitin-like modifier activating enzyme 5

Details for RP23-256J17.2 - dynein light chain Tctex-type 3

Details for - - serum response factor binding protein 1

Details for RP24-215D6.5 - family with sequence similarity 92, member A

Details for - - signal peptidase complex subunit 1 homolog (S. cerevisiae)

Details for RP23-330N10.3 - zinc finger SWIM-type containing 7

Details for - - poly(A)-specific ribonuclease (deadenylation nuclease)

Details for RP23-164N15.2 - pseudouridylate synthase 10

Details for - - small integral membrane protein 15

Details for RP23-203A12.6 - RNA binding motif protein 12 B2

Details for MNCb-2875 - chromodomain helicase DNA binding protein 3, opposite strand

Details for - - SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)

Details for - - ribosomal protein L31

Details for - - chaperonin containing Tcp1, subunit 8 (theta)

Details for - - CDC-like kinase 1

Details for - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1

Details for - - kinesin family member 13A

Details for RP23-319B15.7 - leukotriene C4 synthase

Details for RP23-194P5.2 - platelet-activating factor acetylhydrolase, isoform 1b, subunit 1

Details for - - immunoglobulin (CD79A) binding protein 1

Details for - - succinate-Coenzyme A ligase, ADP-forming, beta subunit

Details for - - transcription factor A, mitochondrial

Details for - - heat shock protein 90, beta (Grp94), member 1

Details for RP23-255J22.4 - cytohesin 1 interacting protein

Details for RP23-331P21.5 - TAR DNA binding protein

Details for - - tropomodulin 3

Details for - - exosome component 9

Details for - - solute carrier family 40 (iron-regulated transporter), member 1

Details for RP23-43O20.5 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1

Details for RP23-121P11.1 - heterogeneous nuclear ribonucleoprotein H1

Details for - - solute carrier family 29 (nucleoside transporters), member 1

Details for RP23-15L19.6 - family with sequence similarity 213, member B

Details for RP23-382C19.5 - RAD52 motif 1

Details for - - small integral membrane protein 7

Details for RP23-282M14.2 - DnaJ (Hsp40) homolog, subfamily C, member 10

Details for RP23-125A1.4 - Crn, crooked neck-like 1 (Drosophila)

Details for - - Yip1 domain family, member 4

Details for - - pyruvate dehydrogenase (lipoamide) beta

Details for RP24-258K7.3 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Details for RP23-138J20.4 - PRP6 pre-mRNA splicing factor 6 homolog (yeast)

Details for - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase)

Details for - - cyclin-dependent kinase inhibitor 3

Details for - - RIKEN cDNA 2700094K13 gene

Details for - - general transcription factor II E, polypeptide 1 (alpha subunit)

Details for - - meiotic nuclear divisions 1 homolog (S. cerevisiae)

Details for RP24-225N8.1 - heterogeneous nuclear ribonucleoprotein M

Details for - - tumor suppressor candidate 3

Details for - - cleavage stimulation factor, 3' pre-RNA subunit 2, tau

Details for RP23-128G10.3 - TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor

GO Terms

3p UTR PITA