TargetScan_66 megaCluster: 11 Residual: 0.14 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
TargetScan_66	11	0.14	15	0	0.957676	0

Members

Displaying 1 - 24 of 24

110033 kinesin family member 22 Details for - - kinesin family member 22 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 110033 Tuberculist Genomic Region	12449 cyclin F Details for - - cyclin F GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12449 Tuberculist Genomic Region
16906 lamin B1 Details for - - lamin B1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16906 Tuberculist Genomic Region	18247 ornithine decarboxylase antizyme 2 Details for - - ornithine decarboxylase antizyme 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18247 Tuberculist Genomic Region
19357 RAD21 homolog (S. pombe) Details for - - RAD21 homolog (S. pombe) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19357 Tuberculist Genomic Region	19363 RAD51 homolog B Details for - - RAD51 homolog B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19363 Tuberculist Genomic Region
20833 structure specific recognition protein 1 Details for RP23-232L15.5 - structure specific recognition protein 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20833 Tuberculist Genomic Region	20878 aurora kinase A Details for - - aurora kinase A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20878 Tuberculist Genomic Region
218977 discs, large (Drosophila) homolog-associated protein 5 Details for - - discs, large (Drosophila) homolog-associated protein 5 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 218977 Tuberculist Genomic Region	22137 Ttk protein kinase Details for - - Ttk protein kinase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 22137 Tuberculist Genomic Region
224171 RIKEN cDNA C330027C09 gene Details for - - RIKEN cDNA C330027C09 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 224171 Tuberculist Genomic Region	241226 integrin alpha 8 Details for RP23-202C2.1 - integrin alpha 8 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 241226 Tuberculist Genomic Region
26611 reticulocalbin 2 Details for - - reticulocalbin 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 26611 Tuberculist Genomic Region	28106 DNA segment, Chr 17, Wayne State University 104, expressed Details for - - DNA segment, Chr 17, Wayne State University 104, expressed GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 28106 Tuberculist Genomic Region
66154 transmembrane protein 14C Details for - - transmembrane protein 14C GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66154 Tuberculist Genomic Region	68730 dihydrouridine synthase 1-like (S. cerevisiae) Details for RP23-99M13.5 - dihydrouridine synthase 1-like (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68730 Tuberculist Genomic Region
71819 kinesin family member 23 Details for - - kinesin family member 23 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 71819 Tuberculist Genomic Region	12585 cerebellar degeneration-related 2 Details for - - cerebellar degeneration-related 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12585 Tuberculist Genomic Region
16907 lamin B2 Details for - - lamin B2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16907 Tuberculist Genomic Region	208836 Fanconi anemia, complementation group I Details for - - Fanconi anemia, complementation group I GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 208836 Tuberculist Genomic Region
27360 adducin 3 (gamma) Details for - - adducin 3 (gamma) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 27360 Tuberculist Genomic Region	66336 centromere protein P Details for - - centromere protein P GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66336 Tuberculist Genomic Region
74041 RIKEN cDNA 4632434I11 gene Details for - - RIKEN cDNA 4632434I11 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74041 Tuberculist Genomic Region	74470 centrosomal protein 72 Details for - - centrosomal protein 72 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74470 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
V_ZFP281_01_M01597	1	0

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.025	ARSMAAWCANAA	NA	1	GGGGGCGGGASC	SP1_MA0079.2, V$SP1_Q6_M00196, V$SP4_Q5_M01273, V$SP1_02_M01303, V$SP1_Q4_01_M00932, V$SP2_01_M01783, V$SP4_03_M02810, V$SP1_Q6_01_M00931, V$SP1_03_M02281, V$SP1_Q2_01_M00933, V$CKROX_Q2_M01175, V$MAZR_01_M00491, V$ZFP281_01_M01597, V$GC_01_M00255, V$ZBP89_Q4_M01816, V$ZNF219_01_M01122, V$BCL6B_04_M02844, V$EGR1_Q6_M01873, V$KLF7_03_M02773, V$MAZ_Q6_M00649, V$E2F3_Q6_M02089, V$SMAD4_04_M02898, V$ZFP281_04_M02831, V$ETF_Q6_M00695, V$KROX_Q6_M00982, V$EGR1_06_M02744, V$ZFP410_04_M02936, V$RNF96_01_M01199, V$SP1SP3_Q4_M01219, V$CACBINDINGPROTEIN_Q6_M00720, V$UF1H3BETA_Q6_M01068, V$FKLF_Q5_M01837, V$WT1_Q6_01_M02036, V$MAZ_Q6_01_M02023, V$GKLF_02_M01588, V$EGR_Q6_M00807, V$SP1_01_M00008, V$ZFP740_03_M02834, V$WT1_Q6_M01118, V$E2F_Q2_M00803, V$NFE4_Q5_M02105, V$CHCH_01_M00986, Sp4.1, Bcl6b.2, Klf7.1, Egr1.1, Smad3.1, Zfp281.2, Zfp410.1, Zfp740.1, Zif268.1, Egr1.2, KLF16_C2H2_DBD_monomeric_11_1, KLF14_C2H2_DBD_monomeric_14_1, SP3_C2H2_DBD_monomeric_11_1, SP1_C2H2_DBD_monomeric_11_1, ZNF740_C2H2_full_monomeric_10_1, SP4_C2H2_full_monomeric_17_1, SP8_C2H2_DBD_monomeric_12_1

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.43	TCCCGC	V$SP2_01_M01783, V$E2F4_Q6_M02090	1.48	TTCGCGGG	Zfp740.2, Smad3.1, GLIS2_C2H2_DBD_monomeric_14_1

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.68	ATGTTG	NA	NA	0.84	AGTGCTGT	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

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