TargetScan_78 megaCluster: 9 Residual: 0.24

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_78 9 0.24 15 0 0.891909 0
Displaying 1 - 47 of 47
105148 isoleucine-tRNA synthetase

Details for - - isoleucine-tRNA synthetase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 105148

Tuberculist Genomic Region

110750 chromosome segregation 1-like (S. cerevisiae)

Details for RP23-19L12.9 - chromosome segregation 1-like (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110750

Tuberculist Genomic Region

13478 dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)

Details for - - dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13478

Tuberculist Genomic Region

14251 flotillin 1

Details for - - flotillin 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14251

Tuberculist Genomic Region

15929 isocitrate dehydrogenase 3 (NAD+), gamma

Details for RP23-373N8.5 - isocitrate dehydrogenase 3 (NAD+), gamma

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15929

Tuberculist Genomic Region

16498 potassium voltage-gated channel, shaker-related subfamily, beta member 2

Details for RP23-421E12.12-005 - potassium voltage-gated channel, shaker-related subfamily, beta member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16498

Tuberculist Genomic Region

17064 CD93 antigen

Details for RP23-70N3.4 - CD93 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17064

Tuberculist Genomic Region

17218 minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)

Details for - - minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17218

Tuberculist Genomic Region

18744 praja1, RING-H2 motif containing

Details for RP23-414J22.4 - praja1, RING-H2 motif containing

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18744

Tuberculist Genomic Region

18974 polymerase (DNA directed), epsilon 2 (p59 subunit)

Details for - - polymerase (DNA directed), epsilon 2 (p59 subunit)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18974

Tuberculist Genomic Region

19076 DNA primase, p58 subunit

Details for - - DNA primase, p58 subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19076

Tuberculist Genomic Region

19714 REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)

Details for - - REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19714

Tuberculist Genomic Region

211389 sulfite oxidase

Details for - - sulfite oxidase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 211389

Tuberculist Genomic Region

226432 importin 9

Details for - - importin 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226432

Tuberculist Genomic Region

226856 lysophosphatidylglycerol acyltransferase 1

Details for - - lysophosphatidylglycerol acyltransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226856

Tuberculist Genomic Region

234353 pleckstrin and Sec7 domain containing 3

Details for - - pleckstrin and Sec7 domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 234353

Tuberculist Genomic Region

320088 RIKEN cDNA C030034L19 gene

Details for - - RIKEN cDNA C030034L19 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320088

Tuberculist Genomic Region

330361 GC-rich sequence DNA binding factor 2

Details for - - GC-rich sequence DNA binding factor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 330361

Tuberculist Genomic Region

56207 ubiquitin carboxyl-terminal esterase L5

Details for - - ubiquitin carboxyl-terminal esterase L5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56207

Tuberculist Genomic Region

59044 ring finger protein 130

Details for RP23-319B15.1 - ring finger protein 130

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 59044

Tuberculist Genomic Region

66129 AhpC/TSA antioxidant enzyme domain containing 1

Details for - - AhpC/TSA antioxidant enzyme domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66129

Tuberculist Genomic Region

66179 2-oxoglutarate and iron-dependent oxygenase domain containing 3

Details for RP23-349B15.2 - 2-oxoglutarate and iron-dependent oxygenase domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66179

Tuberculist Genomic Region

67054 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase

Details for - - phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67054

Tuberculist Genomic Region

67429 NudC domain containing 1

Details for - - NudC domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67429

Tuberculist Genomic Region

69726 SET and MYND domain containing 3

Details for - - SET and MYND domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69726

Tuberculist Genomic Region

70683 UTP20, small subunit (SSU) processome component, homolog (yeast)

Details for - - UTP20, small subunit (SSU) processome component, homolog (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70683

Tuberculist Genomic Region

73341 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6

Details for RP23-372E6.1 - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 73341

Tuberculist Genomic Region

76467 methionine sulfoxide reductase B2

Details for RP23-34E4.2 - methionine sulfoxide reductase B2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76467

Tuberculist Genomic Region

106582 nurim (nuclear envelope membrane protein)

Details for - - nurim (nuclear envelope membrane protein)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 106582

Tuberculist Genomic Region

12567 cyclin-dependent kinase 4

Details for - - cyclin-dependent kinase 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12567

Tuberculist Genomic Region

14218 SH3 and PX domains 2A

Details for - - SH3 and PX domains 2A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14218

Tuberculist Genomic Region

14456 growth arrest specific 6

Details for - - growth arrest specific 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14456

Tuberculist Genomic Region

207965 valosin containing protein lysine (K) methyltransferase

Details for - - valosin containing protein lysine (K) methyltransferase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 207965

Tuberculist Genomic Region

236792 membrane magnesium transporter 1

Details for - - membrane magnesium transporter 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 236792

Tuberculist Genomic Region

331004 solute carrier family 9 (sodium/hydrogen exchanger), member 9

Details for - - solute carrier family 9 (sodium/hydrogen exchanger), member 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 331004

Tuberculist Genomic Region

68493 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4

Details for RP23-372J10.1 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68493

Tuberculist Genomic Region

77744 bora, aurora kinase A activator

Details for - - bora, aurora kinase A activator

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 77744

Tuberculist Genomic Region

108911 regulator of chromosome condensation 2

Details for RP23-275J10.2 - regulator of chromosome condensation 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108911

Tuberculist Genomic Region

223433 family with sequence similarity 105, member A

Details for - - family with sequence similarity 105, member A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 223433

Tuberculist Genomic Region

223921 achalasia, adrenocortical insufficiency, alacrimia

Details for - - achalasia, adrenocortical insufficiency, alacrimia

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 223921

Tuberculist Genomic Region

234797 RIKEN cDNA 6430548M08 gene

Details for - - RIKEN cDNA 6430548M08 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 234797

Tuberculist Genomic Region

238505 5-methyltetrahydrofolate-homocysteine methyltransferase

Details for - - 5-methyltetrahydrofolate-homocysteine methyltransferase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 238505

Tuberculist Genomic Region

52665 enoyl Coenzyme A hydratase domain containing 1

Details for - - enoyl Coenzyme A hydratase domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52665

Tuberculist Genomic Region

14247 Friend leukemia integration 1

Details for - - Friend leukemia integration 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14247

Tuberculist Genomic Region

20226 seryl-aminoacyl-tRNA synthetase

Details for RP23-37G19.1 - seryl-aminoacyl-tRNA synthetase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20226

Tuberculist Genomic Region

52626 CDKN2A interacting protein N-terminal like

Details for RP23-263C23.1 - CDKN2A interacting protein N-terminal like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52626

Tuberculist Genomic Region

54486 hematopoietic prostaglandin D synthase

Details for - - hematopoietic prostaglandin D synthase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54486

Tuberculist Genomic Region

TFs percTargets pValue
ONECUT3_CUT_DBD_monomeric_14_1 0.108696 0.0000358
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.21 GACGCG NA 1.28 NGGCGCCG V$E2F2_04_M02846, V$E2F4_04_M02847, E2F2.2, E2F3.2
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.46 ACGGGT NA NA 0.48 ATNGAANG NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
mmu-miR-201 0.380952 0.0000161
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