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[+] Show/hide bicluster #197 rows and columns.
bicluster 197
Mycobacterium tuberculosis H37Rv
14x22
[+] Show/hide bicluster #197 rows (genes).
bicluster 197 genes
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #197 rows (short gene names).
bicluster 197 short names
Mycobacterium tuberculosis H37Rv
14
short_name
[+] Show/hide bicluster #197 rows (long gene names).
bicluster 197 long names
Mycobacterium tuberculosis H37Rv
14
long_name
[+] Show/hide bicluster #197 rows (NCBI RefSeq gene IDs).
bicluster 197 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
20
[+] Show/hide bicluster #197 gene upstream sequences.
bicluster 197 upstream sequences
Mycobacterium tuberculosis H37Rv
14
upstream
[+] Show/hide bicluster #197 columns (arrays; conditions).
bicluster 197 arrays
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #197 ratios.
bicluster 197 ratios
Mycobacterium tuberculosis H37Rv
14x22
GENES 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.1 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs...0.5.mM.DNO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN...2hr.hypoxia.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN...2hr.hypoxia.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.3 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.2 4107:::X5ug.mL.OfloxvsEtOH..6hA 4615:::OA_50uM_2h_10 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2 Rohde_CellHostMicrobe2007:::CDC1551.ctrl.vs.pH.5.5.7H9.broth.for.2.hr
RV0682 1.20485956180007 1.47004396296181 0.801318081771339 0.697550272621094 -0.997323943499581 -0.812847838343589 -1.12415126579433 -3.43010258024422 -3.32633477109398 -1.93123422585179 -2.42701375845852 -2.21947814015803 -1.81593666012929 -1.14721077893882 -0.916615647493835 -2.26559716644702 0.939675160638333 1.22791907494457 0.466955141176104 1.77670736642615 0.348486892396241 -3.77525
RV0683 1.41964245566026 1.54811688603676 NA NA -1.38110012654731 -0.841507518966038 -1.88215040501564 -2.84570863283935 -3.26967425308178 -1.5866592151497 -1.43248989869791 -1.7408285316015 -1.45818478477321 NA -0.674490759476595 -1.16269359490727 1.00852427845548 1.27832058224612 1.80763523539727 1.6775795812623 1.02859840820181 -3.39931924959016
RV0684 0.674490759476595 1.40294077971132 0.91730743288817 0.674490759476595 -0.944287063267233 -0.903817617698638 -1.38945096452179 -2.76541211385404 -4.19533252394442 -0.863348172130042 -1.40294077971132 -1.25455281262647 -1.02522595440442 -1.18710373667881 -0.620531498718468 0.0404694455685958 1.37596114933225 1.06569539997302 0.507949831210769 1.84810468096587 0.674490759476595 -5.39775
RV0685 0.674490759476595 0.789647718411624 1.01996163628168 0.98705964801453 0.0658039765343019 -2.6157080672385 -1.6121974250904 -2.89537496750929 -3.75082666245521 -0.444176841606538 -1.79315836055973 -1.82606034882688 -1.33253052481961 -1.38188350722034 -0.526431812274416 0.592235788808718 1.26672654828531 0.608686782942293 1.18838848098257 1.1297720221233 0.714758864519974 -4.79916101122091
RV0715 0.742425080574957 0.994752558940302 0.441573087139354 NA -0.655080953448492 NA -1.5382271277272 -2.9260282587366 NA -1.91671834527522 -1.70321047896608 -1.76143989705039 -1.5382271277272 -1.33442416443211 -0.693900565504699 -0.752129983589009 0.519212311251768 0.58714663235013 0.909358077508624 1.78459013444849 0.674490759476595 -4.44236108288461
RV0716 1.20523758660572 1.72492718816965 0 0.641319082781025 -0.774005789563306 -1.52589712799623 -2.46576130103739 -2.36624627095068 -3.62676998538235 -1.21629481217091 -1.1167797820842 -1.24946648886648 -0.774005789563306 -0.740834112867736 -1.01726475199749 -0.707662436172166 1.39321042121395 1.18312313547534 0.928806947475967 1.57603781422254 0.830775203745562 -2.32724069899202
RV0717 0.991602086693203 1.3741490846053 0.669457246346173 NA -0.347312405999142 -1.04193721799743 -1.07213829677996 -2.31038252686386 -2.57212520964582 -2.39091873695062 -2.50165602581991 -2.23991334303795 -1.70636095121318 -0.810395613997999 -0.94126695538898 0.156038907043093 1.04193721799743 1.08220532304081 0.86184930377565 1.19515029310765 0.832116317397756 -3.00051001600743
RV0718 1.00166911295405 1.06207127051912 0.276843222173229 0.699658325128707 -0.850663719041378 -1.67615987243064 -2.54192413086329 -3.05534247016637 -4.02177699120746 -1.26341179573601 -1.67615987243064 -1.43455124217037 -1.40435016338784 -1.77683013503909 -0.911065876606446 -0.206374038347317 0.911065876606446 0.880864797823912 0.794158474867604 2.29013141589728 0.744265665629346 -3.98448358216937
RV1386 0.805037358084968 0 0.805037358084968 1.02261502243226 -1.1314038546059 -1.56655918330048 -1.43601258469211 -2.45862760712436 -1.61007471616994 -0.674490759476595 -1.02261502243226 -1.52304365043102 -0.870310657389155 -1.61007471616994 0.348124262955662 -2.52390090642855 0.783279591650239 2.76323633721057 0.492897093463666 -0.0364589599717078 1.62137201797258 -2.08179932745048
RV1387 0.204391139235332 -0.183952025311799 0.838003670864861 0.919760126558994 -0.143073797464732 -1.88039848096505 -0.143073797464732 -4.29221392394197 -5.27329139227156 -2.53445012651812 -3.29069734168884 -3.20894088599471 -2.45269367082398 -1.04239481010019 -0.878881898711927 -0.572295189858929 0.919760126558994 1.32854240502966 0.349289857586094 0.615839389087326 0.805301088587208 -4.494
RV2904C 1.01173613921489 1.09604748414947 0.708215297450425 0.961149332254148 0.202347227842979 -0.708215297450425 -1.56819101578308 -3.25441791447457 -5.75003372453797 -0.876837987319574 -1.50074193983542 -1.29839471199245 -0.876837987319574 -1.50074193983542 -0.438418993659787 -1.09604748414947 0.640766221502765 1.29839471199245 0.604715853323844 1.2957322484682 0.851143101244275 NA
RV3442C 1.48853133125869 1.83740586202245 0.232583020509171 1.20943170664769 -0.279099624611005 -2.53515492354996 -1.46527302920778 -2.20953869483712 NA -2.11650548663345 -1.97695567432795 -1.9071807681752 -1.86066416407337 0.186066416407337 -1.27920661280044 -1.65133944561511 1.97695567432795 1.37223982100411 0.965326224572008 0.778258568626841 1.40223078943818 -3.93811671829217
RV3443C 1.00151658225313 1.53293354426499 1.04239481010019 1.06283392402373 -0.0613173417705996 -1.02195569617666 -1.83952025311799 -1.38985974680026 -3.67904050623597 -0.694929873400128 -0.96063835440606 -0.817564556941327 -0.347464936700064 0.0204391139235332 -0.858442784788394 -2.10522873412392 0.347464936700064 0.878881898711927 0.954468055863106 0.888079499977517 0.894324784787485 -3.34825
RV3920C 0.933306981136219 1.12153696052504 1.54505441414988 0.352931211354032 -0.384302874585502 -1.95288603615898 -1.56074024576561 -4.44693326306081 -5.4821981496993 -0.258816221659624 -1.48231108768694 -1.48231108768694 -1.45093942445547 -0.556847022358584 -2.20385934201074 -1.0587936340621 0.164701231965215 0.83919199144181 0.610253544288348 1.82362316451079 0.613173417705996 -4.59625
[+] Show/hide bicluster #197 motif PSSM #1. bicluster 197 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0 0 0 1
2 0 0 0.6 0.4
3 0.8 0 0 0.2
4 0.2 0.8 0 0
5 0.2 0.4 0 0.4
6 0.8 0 0 0.2
7 0 0 0 1
8 0 1 0 0
9 0.2 0.4 0 0.4
10 0 0 0 1
11 0 0 0.2 0.8 [+] Show/hide bicluster #197 motif PSSM #2. bicluster 197 motif PSSM #2 Mycobacterium tuberculosis H37Rv 9x4
POSITION A C G T
1 0 1 0 0
2 0 0.2 0.8 0
3 1 0 0 0
4 0 1 0 0
5 1 0 0 0
6 0.6 0 0.2 0.2
7 0.8 0 0 0.2
8 0 0.6 0.4 0
9 1 0 0 0 |