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[+] Show/hide bicluster #376 rows and columns.
bicluster 376
Mycobacterium tuberculosis H37Rv
8x240
[+] Show/hide bicluster #376 rows (genes).
bicluster 376 genes
Mycobacterium tuberculosis H37Rv
8
[+] Show/hide bicluster #376 rows (short gene names).
bicluster 376 short names
Mycobacterium tuberculosis H37Rv
8
short_name
[+] Show/hide bicluster #376 rows (long gene names).
bicluster 376 long names
Mycobacterium tuberculosis H37Rv
8
long_name
[+] Show/hide bicluster #376 rows (NCBI RefSeq gene IDs).
bicluster 376 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
16
[+] Show/hide bicluster #376 gene upstream sequences.
bicluster 376 upstream sequences
Mycobacterium tuberculosis H37Rv
8
upstream
[+] Show/hide bicluster #376 columns (arrays; conditions).
bicluster 376 arrays
Mycobacterium tuberculosis H37Rv
240
[+] Show/hide bicluster #376 ratios.
bicluster 376 ratios
Mycobacterium tuberculosis H37Rv
8x240
GENES 2867:::H37Ra..7H9.shake.replicate.1 2867:::H37Ra..Youman.media.replicate.1 2867:::H37Rv..Dubos.media.replicate.3 2885:::H37Rv..7H9.roll.replicate.1 2885:::Strain.9700665..replicate.1 2885:::Strain.9800608..replicate.1 2885:::Strain.9802501..replicate1 2885:::Strain.9802826..replicate.4 2885:::Strain.CDC1551..replicate.3 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.5 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.5 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.1 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.05.mM.DETA.NO.rep.2 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.3 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.4 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.1 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.5 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.2 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.4 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.3 4100:::H37Rv.0.2..Oxygen..2h..6 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6 4101:::H37Rv.Day24.1 4101:::H37Rv.Day24.3 4101:::H37Rv.Day60.1 4101:::H37Rv.Day60.2 4101:::H37Rv.Day60.3 4101:::NRP.Day20..1 4101:::NRP.Day8..3 4107:::EMB.10ug.mL.vs.DMSO.12h.3 4107:::pH4.8vspH6.8..2h. 4107:::pH4.8vspH6.8..2h.A 4107:::pH4.8vspH6.8..4h.A 4107:::pH4.8vspH6.8..4h.B 4107:::pH5.2vspH6.8..10.5h. 4107:::pH5.2vspH6.8..11h. 4107:::pH5.2vspH6.8..16h. 4107:::pH5.2vspH6.8..2h. 4107:::pH5.2vspH6.8..5.5h. 4107:::pH5.6vspH6.8..11h. 4107:::pH5.6vspH6.8..16h. 4107:::pH5.6vspH6.8..5h. 4107:::Rif.5ug.mL.vsDMSO.2.5h 4107:::X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050. 4107:::X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053. 4107:::X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052. 4107:::X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046. 4107:::X.241..10ug.mL..DMSO..12h..1 4107:::X.241..10ug.mL..DMSO..12h..2 4107:::X0.12mg.mL.BZAvspH5.6..5h. 4107:::X0.12mg.mL.Nam.pH5.6..4h..2 4107:::X0.12mg.mL.PZA.pH5.6..2.5h. 4107:::X0.12mg.mL.PZA.pH5.6..4h..1 4107:::X0.1mg.mL.TriclosanvsEtOH..6hA 4107:::X0.1ug.mL.Mtmvsctrl..1.5h. 4107:::X0.2mg.mL.AmpvsEtOH..6hA 4107:::X0.2ug.mL..111891.DMSO..5.5h..1 4107:::X0.4mM.NaN3vsDMSO..4h 4107:::X0.5ug.mL.CeruleninvsDMSO..6hC 4107:::X0.5ug.mLRifapentinevsEtOH.6h 4107:::X1.2mg.mL.NamvspH5.6..5h. 4107:::X10ug.mL..109vsDMSO..6hA 4107:::X10ug.mL..241vsDMSO..6h 4107:::X10ug.mL..59vsDMSO..6h 4107:::X10ug.mL..59vsDMSO..6hA 4107:::X10ug.mL.Amikacin.EtOH..6h 4107:::X10ug.mL.PA.1vsDMSO..6h 4107:::X10ug.mLchlorpromazinevsctrl.6h 4107:::X1ug.mL..109vsDMSO..6h 4107:::X2.5mM.Dinitrophenol.DMSO..6h 4107:::X2ug.mL..111891vsDMSO..6h 4107:::X2ug.mL..111895vsDMSO..6hB 4107:::X4mM.H2O2vsctrl..4h.A 4107:::X50ug.mLAntimycinAvsDMSO..6h 4107:::X5ug.mL.OfloxvsEtOH..6h 4107:::X9ug.mLNaturalproductvsDMSO.6h 4363:::H37Rv.hypoxia.1.day.rep.5 4363:::H37Rv.hypoxia.12hr.rep.2 4363:::H37Rv.hypoxia.7.day.rep.2 4363:::H37Rv.hypoxia.7.day.rep.5 4363:::H37Rv.hypoxia.7.day.rep.7 4365:::H37Rv.diamide.1h.rep.1 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.1 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.4 4396:::Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.4 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.6 4570:::MTB.strain.TB294.Ctrl.vs.SigA.overexpression.rep1 4570:::MTB.strain.TB294.SigA.overexpression.va.Ctrl.DS..rep1 4570:::MTB.strain.TB294.SigA.overexpression.vs.Ctrl..DS..rep2 4575:::Extracted.Lung.Surfactant.2hrs.rep.2 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep3 4575:::Whole.Lung.Surfactant.2hrs.rep.1 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection..DS..rep.1 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.3 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages.rep.1 4615:::AA_30uM_24h_02 4615:::AA_30uM_24h_03 4615:::AA_30uM_2h_05 4615:::AA_30uM_4h_07 4615:::aceatate.induction.3 4615:::Acetate.3mM.10m.06 4615:::Acetate.3mM.2h.04 4615:::C2_ceramide_25uM_1h_01 4615:::CK_OA_NA_0.05_2h 4615:::CK.1.2h.for.AA.NA.and.LA.NA 4615:::CK.AA.Na.2h 4615:::CK.for.OA.PA.Na.4h 4615:::ETYA_30uM_10min.03 4615:::L2A_30uM_10min_03 4615:::L2A_30uM_10min_08 4615:::L2A_30uM_2h_04 4615:::L2A_30uM_4h_06 4615:::MTB1254_FA5_10min_01 4615:::MTB1254_Pellicle_10D_02 4615:::MTB1254_Pellicle_14D_02 4615:::MTB1254_Pellicle_14D_03 4615:::MTB1254.0485.1._AA_10m_01 4615:::MTB1254.3524.1._OA_10min_01 4615:::MTB1254.3524.1._OA_10min_02 4615:::MTB1254.3524.1._PA_12h_05 4615:::MTB1254.3524.1.T0_WtT0_02 4615:::MTB1254.B4.1.Compl._OA_30MIN_02 4615:::MTB1254TA1_OA.30min_02 4615:::MTB889_PA50_1h_03 4615:::OA_50uM_10min_01 4615:::OA_50uM_10min_07 4615:::OA_50uM_1h_03 4615:::OA_50uM_24h_05 4615:::OA_50uM_2h_01 4615:::OA_50uM_2h_02 4615:::OA_50uM_4h_02 4615:::PA_50uM_10min_05 4615:::PA_50uM_12h_01 4615:::PA_50uM_1h_09 4615:::PA_50uM_24h_02 4615:::PA_50uM_2h_T0_01 4615:::PA_50uM_30.min_06 4615:::PA_50uM_30.min_07 4615:::PA_50uM_3d_01 4615:::PA_50uM_3d_03 4615:::PA_50uM_4h_03 4615:::PA_50uM.AA_30uM_30min_02 4615:::PA_50uM.OA_10uM_12h_02 4615:::PA_50uM.OA_10uM_24h_02 4615:::PA_50uM.OA_10uM_2h_02 4615:::PA_50uM.OA_10uM_30min_01 4615:::PA_50uM.OA_10uM_4h_03 4615:::PA_50uM.OA_30uM_30min_02 4615:::PA_5uM_2h_T0_01 4615:::Rv.MT71_100503_02 4615:::Rv.MT71_100703_01 4615:::Rv.MT90_100503_01 4615:::Rv.MT96_100603_01 4615:::Rv.p0485.1._300uM.PA_10m 4615:::Spe_100uM_30M_01 4615:::Starvation_1254_5d_01 4615:::Starvation_1254_5d_03 4615:::Starvation_1254_OA50_24h_03 4615:::Starvation_1254_OA50_6h_02 4615:::Starvation_1254_OA50_6h_03 4615:::Starvation_1254_PA50_24h_02 4615:::Starvation_1254_PA50.OA30_24h_02 4615:::Starvation_OA50_24h_03 4615:::Starvation_OA50_24h_04 4615:::Starvation_OA50_6h_03 4615:::TBD041 4615:::TBD045 4615:::TBD091 4615:::TBD099 4615:::TBD1267 4615:::TBD664 4615:::TBE285 4615:::TBE735 4615:::Test_ceramide_5uM 4615:::Tet_100uM_30M_01 4615:::WM_1254_10d_02 4615:::WM_1254_14d_01 4615:::WM_1254_14d_02 4615:::WM_1254.whiB4._10d_01 4615:::WM_1254.whiB4._10d_03 4615:::WT_65.4_SDS_02 4615:::X2.2..Dipyridyl_0.2mM.Dpd.AA_50uM_01 4615:::X2.2..Dipyridyl_1mM_20min_01 4615:::X7H9_PA100um_4h_T0_01 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosS.null.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak.4hr.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2 4703:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant..DS..rep.2 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.3 4731:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.5 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.3 4815:::H37Rv.reaeration.for.12hrs.rep.6 4815:::H37Rv.reaeration.for.24hrs.rep.3 4815:::H37Rv.reaeration.for.24hrs.rep.5 4815:::H37Rv.reaeration.for.4hrs.rep.4 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.4 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.5 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.6 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2 Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages...IFNg.for.4hrs
RV1401 -0.463712397140158 NA 0.0421556724672876 1.11290975313638 1.34898151895319 0.370969917712127 0.910562525293404 NA -0.607041683528936 0.809388911371914 -1.01173613921489 -0.427177481001844 0.0232583020509171 0.627974155374761 0.39539113486559 0.627974155374761 -1.79088925792061 0.116291510254585 -0.348874530763756 0.302357926661922 1.46527302920778 1.46527302920778 1.60482284151328 -1.34898151895319 -0.130546598608373 0 -0.58745969373768 -0.70381644467123 -1.55426131531563 0.733142129865864 -0.234605481557077 0.205279796362442 0.938421926228306 0.586513703892691 -0.146628425973173 0.522186394433493 -0.674490759476595 NA -0.834820530171851 -0.525218214346529 -0.70213382338957 -0.713191048954761 0.989621688084513 1.23288065051869 0.525218214346529 0.61367601886805 0.61367601886805 0.845877755737042 -0.414645958694628 0.263931166751711 -2.11144933401369 -0.879770555839037 -1.11437603739611 -1.17302740778538 -0.674490759476595 -0.909096241033672 -1.08505035220148 -1.90616953765125 -0.586513703892692 -0.469210963114153 -0.439885277919519 -1.6129126857049 2.40470618596003 1.49560994492636 1.40763288934246 1.6129126857049 0.879770555839037 1.6129126857049 1.02639898181221 -1.11437603739611 -2.43403187115467 1.02639898181221 -0.762467815060499 -0.557188018698057 -0.469210963114153 -0.351908222335615 -1.64223837089954 0.410559592724884 0.381233907530249 -0.146628425973173 -0.439885277919519 1.08505035220148 1.34898151895319 1.05572466700684 1.02639898181221 -0.410559592724884 0.762467815060499 -1.05572466700684 1.02639898181221 1.40763288934246 0.381233907530249 0.146628425973173 0.381233907530249 0.879770555839037 -0.0293256851946346 0.293256851946346 -1.45777035112683 -0.957341723128071 -1.21843492034482 -1.50128588399629 0 -0.236071765816808 0.573317145555106 1.85484958856064 NA -1.3 0.5 0.05 0 -1.3 -0.530746827129124 0.818234691824066 0.530746827129124 0.459227751133001 -0.803648564482752 0.287017344458126 -1.57859539451969 1.377683253399 0.0287017344458125 1.27722718283866 1.53554279285097 -0.0287017344458126 -1.21982371394703 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.75880210441117 0.798739057274915 -0.745489786789921 0.461493677536618 -0.376921306766332 -0.5 0.1 1.5 0.55 -0.275 0.758802104411169 -0.674490759476595 -1.3 -0.925 1.31965583375856 -1.44533734173556 0.727048480994252 1.74316443033562 0.621933037958938 NA 1.703388915 -0.13227945 NA NA 0.95813798118255 0 -1.34489543003104 -0.249999999999999
RV1413 1.71031585438708 -0.794935537954559 -0.0722668670867781 1.51385703793636 1.06419653161863 -0.764422860740141 0.254807620246714 -0.914309696179385 -2.32324594930827 1.68622689869149 -0.637019050616784 0 0.35 0.1 0.1 -1.55 -1.75 -2.55 0.45 -0.05 0.6 0.4 0.75 NA NA NA NA -0.126467017401862 -1.51760420882234 -0.674490759476595 -0.674490759476595 0.421556724672872 1.34898151895319 -1.01173613921489 -1.09604748414947 NA -0.39163979582512 NA NA NA NA NA NA NA NA NA NA NA NA 0.778258568626841 -1.05497272636083 -0.674490759476595 -2.47313278474752 -2.09265081786328 -0.466955141176104 -0.951204917210583 -1.19332980522782 -0.536133680609601 -0.363187332025859 -0.432365871459356 NA -0.639901489759847 1.6084010418288 0.0518839045751227 1.05497272636083 1.15874053551107 -0.0172946348583742 1.71216885097905 1.08956199607758 -0.466955141176104 -0.501544410892853 -1.12415126579433 -1.40086542352831 0.639901489759847 -0.363187332025859 -0.501544410892853 -1.19332980522782 0.12106244400862 0.259419522875614 1.53922250239531 -0.12106244400862 -0.224830253158865 0.951204917210583 NA 0.882026377777086 1.12415126579433 0.224830253158865 -0.0172946348583742 0.0172946348583742 3.02656110021549 0.985794186927331 0.847437108060338 2.12724008758003 -0.32859806230911 1.29709761437807 0.328598062309111 NA NA NA NA NA -0.35 -0.1 0.15 NA 0.1 -0.2 1.16668671909465 1.16668671909465 -0.0729179199434157 -1.33211924996628 0.72507756643734 0.623903952515851 0.441484860748317 -0.441484860748317 0.613173417705996 -1.50227487337969 1.93149626577389 0.337245379738298 1.71688556957679 1.65556822780619 -1.41029886072379 0 -0.202347227842979 -0.438418993659787 0.674490759476595 -0.134898151895319 0.438418993659787 -0.404694455685957 -0.168622689869149 -0.910562525293404 0.0674490759476595 NA 0.0674490759476595 -1.71995143666532 0 -1.04546067718872 -1.01173613921489 -0.809388911371914 0.0674490759476595 0.607041683528936 -1.82112505058681 -1.11290975313638 -0.438418993659787 -0.573317145555106 1.11290975313638 0.607041683528936 -0.809388911371914 1.38270605692702 -0.775664373398085 1.55132874679617 -0.674490759476595 -0.337245379738298 -0.303520841764468 -0.0337245379738297 0 1.41643059490085 -0.607041683528936 -0.168622689869149 0.134898151895319 0.910562525293404 0.505868069607447 -2.39444219614191 1.51760420882234 1.2478079050317 1.11290975313638 0 -0.539592607581276 -0.303520841764468 -0.168622689869149 0 -2.22581950627276 0.134898151895319 -0.978011601241063 -0.741939835424255 -0.741939835424255 -1.21408336705787 0 0.944287063267233 0.101173613921489 -0.0674490759476595 0.775664373398085 0.978011601241063 0 0.809388911371914 0.236071765816808 1.01173613921489 0.303520841764468 -0.809388911371914 1.01173613921489 -0.539592607581276 -1.2478079050317 0.202347227842979 1.98974774045596 1.28153244300553 0.910562525293404 0.640766221502766 0.472143531633617 0.0337245379738298 -0.708215297450425 -0.539592607581276 0.505868069607447 -0.101173613921489 1.28153244300553 0.876837987319574 1.65250236071766 1.61877782274383 1.01173613921489 1.38270605692702 0.607041683528936 -1.65250236071766 0.674490759476595 0.550604701613547 0.198797276477312 -0.298195914715968 1.3063821025652 -0.674490759476595 0.500053494094717 1.59319369048782 -0.0348874530763756 1.03499444126581 -0.539592607581276 0.700432711764157 -1.34898151895319 -1.15626987338845 -0.125 1.22853674047523 NA NA NA NA NA NA NA -0.6936615475 0.2141762125 0.0590234175 -0.1549987875 -0.6920118725 0.5
RV2079 0.981077468329594 -0.674490759476595 0.183952025311799 0.524603924037352 NA 1.16162297465414 1.42392493667281 -1.7236986075513 -0.224830253158865 0.919760126558994 -0.490538734164797 -0.674490759476595 0 0.289067468347112 0.770846582258966 -1.49351525312675 -2.3125397467769 -1.39715943034438 -0.0481779113911853 0.433601202520668 0.337245379738298 0.337245379738298 0.433601202520668 -0.200524279844393 -0.947932959264404 1.05730983917953 0.0182294799858538 -0.45 -0.15 -1.25 0.8 0 0.3 -0.5 0.1 NA 0 -0.5 -0.6 -0.6 -0.55 -0.5 0.8 NA 1.25 0.85 0.8 0.65 -0.35 0.39675927028035 -0.95222224867284 -0.63481483244856 -1.38865744598123 -1.70606486220551 -0.991898175700875 -0.7935185405607 -1.07125002975695 -1.30930559192516 -0.71416668650463 -0.7935185405607 -1.15060188381302 -2.18217598654193 1.07125002975695 0.436435197308385 1.42833337300926 1.19027781084105 0.277731489196245 1.50768522706533 1.42833337300926 -1.22995373786909 -1.22995373786909 -0.63481483244856 -0.912546321644805 0.515787051364455 -1.42833337300926 -0.357083343252315 -0.436435197308385 -0.277731489196245 1.42833337300926 0 -0.31740741622428 0.595138905420525 1.5870370811214 NA 0.436435197308385 0.63481483244856 0.912546321644805 -0.31740741622428 1.4680093000373 0.95222224867284 0.277731489196245 1.26962966489712 0.833194467588735 0.95222224867284 -0.039675927028035 0.71416668650463 NA NA NA NA NA -0.75 0 1.25 0.161877782274383 -0.764422860740141 0.404694455685957 -0.0562075632897162 -0.0187358544299054 -0.993000284784987 -0.925 0.825 0.0750000000000001 0.718479287268547 -0.410559592724884 0.689153602073913 -0.415071236600982 1.79864202527092 0.44966050631773 2.2137132618719 1.76405275555417 -0.415071236600982 -1.0722673612192 -0.8 -0.15 0.3 -0.55 -2.75 1.65 0.05 -1.45 -0.05 -0.85 -0.65 -3.25 -0.85 -0.2 -2.95 -0.95 -1.45 -0.95 -0.45 -0.1 -0.2 -0.4 1.4 0.95 -0.55 1.6 -0.7 0.45 0.65 0.65 -0.75 1.4 -0.5 0.65 -0.8 -1 -0.35 0.4 0.95 NA 0.65 0.9 0.7 -0.6 -0.65 0.4 -1.05 -1.6 -0.25 0.25 -1.65 -0.25 -0.25 -1.2 -0.5 0.95 0.6 0.85 0.35 0.1 0.5 -0.15 1.65 0.4 1 1.1 0.75 -1.3 -1.35 -1.5 1.85 0 0.5 -0.1 -0.8 -1 -0.35 -0.25 -0.5 0.2 0.95 0.65 0.85 1.3 0.95 0.45 0.75 -0.25 -0.15 0.837298873833015 0.548023742074734 -0.0281037816448581 0.702594541121453 -0.539592607581276 -0.151760420882234 0.961149332254148 0.792526642384999 0.994873870227978 -0.485633346823149 NA NA -1.45 -0.55 0.798376817339643 NA NA 1.26305912921095 1.25446689023672 NA 0 -0.234880165 NA 0.944428655906844 0.130715486825736 -0.130715486825736 -0.627874251950284 0.449660506317729
RV2712C NA NA NA 0.359728405054184 0.674490759476595 0.539592607581276 0.764422860740141 NA -0.854354962003687 1.4 -0.7 0.35 -0.95 1.15 0.7 -0.7 -2.1 0.05 0.8 0.05 0.1 1.05 0.3 -0.701470389855659 -0.593551868339404 0.971266693646297 -0.0539592607581276 -0.698579715172188 0.409512246825076 -1.85484958856064 -0.698579715172188 0.313156424042705 0.505868069607446 -0.0240889556955927 -2.19209496829893 0.55 -1.33998830882684 -1.15225504743918 -1.12415126579433 -0.590179414542021 -1.18035882908404 -1.01173613921489 3.70969917712127 0.955528575925176 1.06794370250461 1.65812311704663 1.79864202527092 1.93916093349521 -0.112415126579433 0.0709990273133259 -0.106498540969989 0.0354995136566629 -0.816488814103247 -0.958486868729898 -0.780989300446584 -0.496993191193281 -0.354995136566629 -0.780989300446584 -0.532492704849943 -0.567992218506606 -0.958486868729898 -1.95247325111646 0.212997081939977 0.922987355073235 1.95247325111646 0.496993191193281 0.0709990273133259 2.4849659559664 0.958486868729898 -0.496993191193281 0.212997081939977 -1.13598443701321 -0.887487841416573 0.141998054626652 -0.212997081939977 0.177497568283315 -1.06498540969989 0.106498540969989 0.958486868729898 0.24849659559664 -0.638991245819932 0.603491732163269 1.13598443701321 NA 0.319495622909966 0.319495622909966 1.10048492335655 -0.780989300446584 0.958486868729898 1.70397665551982 0.780989300446584 0.922987355073235 0 0.993986382386561 0.958486868729898 0.354995136566629 0.239335430782018 -0.674490759476595 NA -0.217577664347289 0.739764058780782 NA NA NA NA -0.0240889556955927 1.61396003160471 0.472143531633617 1.04546067718872 -0.775664373398084 NA NA NA 1.94045803110959 -0.394317674770933 0.726374664051718 -0.755429650613787 NA NA NA NA NA NA 0.039675927028035 -0.39675927028035 0.039675927028035 -0.07935185405607 -2.10282413248586 NA -0.436435197308385 -1.54736115409337 -0.912546321644805 -0.55546297839249 0.039675927028035 -1.98379635140175 -0.436435197308385 -0.436435197308385 -1.03157410272891 -0.15870370811214 -0.95222224867284 -0.991898175700875 0.436435197308385 NA 0.07935185405607 -0.595138905420525 0.07935185405607 -0.71416668650463 -0.95222224867284 0.357083343252315 -0.357083343252315 0.71416668650463 1.82509264328961 0.07935185405607 -1.34898151895319 0.63481483244856 -1.15060188381302 1.30930559192516 -0.674490759476595 -0.63481483244856 -1.03157410272891 1.5870370811214 -0.436435197308385 -2.81699081899049 0.55546297839249 0.95222224867284 0.357083343252315 -0.31740741622428 -0.436435197308385 -0.31740741622428 -1.15060188381302 0.07935185405607 -0.47611112433642 0.277731489196245 -0.833194467588735 -0.7935185405607 -0.436435197308385 -0.15870370811214 -0.595138905420525 0.119027781084105 0.198379635140175 0.47611112433642 0.23805556216821 0.674490759476595 1.62671300814944 2.30120376762603 1.50768522706533 1.4680093000373 1.38865744598123 0.833194467588735 1.38865744598123 -1.4680093000373 -1.38865744598123 -1.38865744598123 1.50768522706533 0.277731489196245 -0.07935185405607 0.912546321644805 -0.47611112433642 -0.833194467588735 -0.15870370811214 -0.833194467588735 -0.674490759476595 0.515787051364455 0.436435197308385 0.515787051364455 1.11092595678498 1.5870370811214 1.4680093000373 0.55546297839249 0.277731489196245 -1.22995373786909 0.357083343252315 0.769489457994426 0.408782278470664 0 1.04239481010019 -0.314146381126085 -0.286340416758932 0.54086523165576 0.642675157614492 0.999009898470051 0.122634683541199 NA NA 1.075 NA 0.582514746820696 NA 1.59995482480495 -0.982978781252712 0.345088295546165 -0.785873883767248 2.05554358060023 NA NA NA NA NA NA NA
RV2921C 0.539592607581276 NA 1.18035882908404 1.64875518983168 1.29901924047344 0.274792531638613 0.199849113918991 -0.749434177196217 0.699471898716469 0.716646431943882 -0.590179414542021 -2.06562795089707 -0.55 0.55 0 -1.75 -1.9 -5.45 0.6 0.25 0.5 0.4 0.95 -1.36881948246721 -0.257893525682228 0.23805556216821 NA NA 0 -1.04546067718872 -0.978011601241063 0.337245379738298 0.0674490759476596 -1.78740051261298 -1.88857412653447 -0.65 -1.10685663093595 NA -0.433601202520668 NA NA 0.0674490759476595 0.876837987319574 NA 1.03100730377137 0.722668670867781 NA 1.49351525312675 -1.03100730377137 0.44966050631773 -1.67016759489443 -2.34465835437102 -0.995676835417831 -0.738727974664842 0 -1.02779544301195 -0.931439620229584 -1.57381177211206 -0.0642372151882472 -0.0642372151882472 -1.0920326582002 -1.6380489873003 -0.224830253158865 -0.192711645564741 0.0642372151882471 0.835083797447213 -0.44966050631773 0.0642372151882471 0.0963558227823707 -2.34465835437102 -1.38110012654731 -0.289067468347112 -1.31686291135907 0.224830253158865 -1.95923506324154 0.289067468347112 -1.70228620248855 0.0321186075941236 0.385423291129483 0.289067468347112 -0.578134936694225 0.738727974664842 1.31686291135907 0.417541898723607 0.44966050631773 -0.224830253158865 0.89932101263546 -0.674490759476595 0.321186075941236 1.89499784805329 0.89932101263546 1.2205070885767 -0.706609367070719 0.546016329100101 0.256948860752989 1.15626987338845 -1.27158093999686 0.210087285738612 NA -0.453346248172793 0.785063015128496 -2.3 -0.25 0.75 -0.475 -0.075 0.425 0.025 1.275 -0.475 -0.165858383477851 0.165858383477851 1.18312313547534 0.578134936694224 0.0825907052420321 0.688255877016934 0.166178882769596 1.47605948812994 NA 0.987298068219364 0.674490759476595 -0.303032080344557 -1.26100446336929 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.546016329100101 1.10809196199726 -0.465719810114792 0.867202405041337 0.15870370811214 -0.12424829779832 0.869738084588241 -0.230746838768309 1.8637244669748 -1.18035882908404 NA NA -2.63051396195872 -0.325 0.403541480028732 0.401048559688786 0.145835839886831 0.856785559335134 -0.0729179199434157 NA NA NA NA NA NA NA NA 1
RV3471C NA NA NA NA NA NA NA NA NA 0.075 0.525 NA -1.10166824047844 -0.269796303790638 -0.044966050631773 -0.652007734160709 -1.57381177211206 -2.0009892531139 1.41643059490085 0.157381177211206 -0.494626556949503 0.607041683528936 -0.202347227842979 NA NA NA NA -1.8 -0.95 -0.95 -0.75 0.35 0.6 -1.9 0 -0.29508970727101 NA NA NA NA NA NA NA NA NA NA NA NA NA 1.20943170664769 NA 0.279099624611005 NA -0.0465166041018342 -0.232583020509171 -0.418649436916507 -0.814040571782098 NA -0.418649436916507 0.0465166041018342 -0.511682645120176 0.0232583020509171 1.51178963330961 1.11639849844402 0.744265665629346 1.30246491485136 0.976848686138517 NA 2.55841322560088 0.139549812305502 0.581457551272927 -2.09324718458254 NA 0.418649436916507 -0.837298873833015 NA NA NA -0.139549812305502 0.767523967680263 NA 0.604715853323844 3.25616228712839 NA 1.95369737227703 NA 1.72111435176786 0 1.97695567432795 0.814040571782098 1.00010698818943 NA 2.60492982970271 0.465166041018342 0.279099624611005 0.116291510254585 NA NA NA NA NA -0.75 0.15 1.55 NA NA NA 0.944287063267233 1.02522595440442 0.107918521516255 NA NA NA 0.624061543814794 -1.38049977874182 1.31746325916456 NA NA NA NA NA NA NA NA NA NA -0.674490759476595 NA 1.85484958856064 -0.0722668670867781 NA NA NA NA NA 0.0722668670867781 NA -0.505868069607446 NA -0.9876471835193 -0.240889556955927 -0.819024493650151 -0.867202405041337 -0.216800601260334 -0.891291360736929 0.963558227823707 2.07165018982097 -0.529957025303039 1.39715943034438 0.0481779113911853 3.39654275307857 1.56578212021352 0.144533734173556 -0.915380316432522 0.0963558227823707 -0.120444778477963 0.578134936694224 NA NA NA 1.03582509491049 1.25262569617082 NA 1.95120541134301 0.36133433543389 0.794935537954559 -1.13218091769286 -0.409512246825076 1.73440481008267 -1.30080360756201 -1.54169316451793 -1.18035882908404 0.337245379738298 -2.93885259486231 -0.529957025303039 -1.13218091769286 NA -0.891291360736929 1.68622689869149 0.698579715172188 0.457690158216261 0.192711645564741 0.0722668670867781 1.61396003160471 1.13218091769286 0.216800601260334 1.71031585438708 0.602223892389817 0.843113449345744 1.95120541134301 -1.99938332273419 -1.78258272147386 -1.42124838603997 1.75849376577827 2.40889556955927 0.578134936694224 2.04756123412538 -0.794935537954559 -1.13218091769286 0 -0.62631284808541 -1.3248925632576 0.36133433543389 -0.216800601260334 0.433601202520668 0.578134936694224 0.843113449345744 0.0722668670867781 -0.0722668670867781 1.42124838603997 -0.819024493650151 1.30080360756201 1.03658579877456 1.1512859515204 -0.670614375801442 0.143426195980655 -0.415781975019819 -0.327877452523345 1.02110406642985 0.852481376560697 1.48950042717748 -0.75342052920258 NA NA 0 NA 2.14250005951389 -1.33253052481961 NA 1.23382456001816 0.279666900270783 -0.575766522543956 0.575766522543956 -0.773214996409234 NA NA NA NA NA 0.25
RV3727 1.43845478296539 0.502426790222362 0.0481779113911854 0.836368541750978 0 -0.188857412653447 -0.242816673411574 0.188857412653447 -1.24106299743694 0 -0.674490759476595 -0.44966050631773 0.0164509941335755 0.427725847472963 0.625137777075869 -1.51349146028895 -1.23382456001816 -1.743805378159 0.263215906137208 0.542882806407991 0.246764912003632 0.871902689079501 0.625137777075869 NA NA NA NA -0.735808101247195 NA -1.59425088603559 -0.0919760126558994 -0.245269367082398 0.214610696197098 -1.41029886072379 -0.367904050623597 1.02261502243226 -0.164509941335755 0.206698781129924 NA 0.424276445477213 0 -0.076152182521551 0.728885175563417 NA 0.859431774171791 0.989978372780164 0.957341723128071 0.0435155328694578 -1.03349390564962 0.863348172130042 0.269796303790638 -0.296775934169702 -0.458653716444085 -0.512612977202212 0.188857412653447 -0.377714825306893 NA 0.242816673411574 -0.809388911371914 0.269796303790638 -0.0269796303790638 -0.21583704303251 1.07918521516255 0.485633346823149 0.890327802509106 0.458653716444085 0.728450020234723 0.944287063267233 1.10616484554162 0.161877782274383 -0.782409280992851 -0.107918521516255 -0.539592607581276 0.0809388911371914 -0.242816673411574 -0.404694455685957 -0.0539592607581276 0.890327802509106 0.0809388911371914 0.404694455685957 -0.134898151895319 0.0809388911371914 0.593551868339404 1.42992041009038 0.134898151895319 -0.107918521516255 1.59179819236476 0.269796303790638 -0.0269796303790638 1.05220558478349 0.323755564548766 0.404694455685957 0.944287063267233 0.512612977202212 -0.620531498718468 0.269796303790638 NA NA NA NA NA 0.1 0.25 1 -0.674490759476595 -1 1.55 1.81908113919445 0.674490759476595 NA NA NA NA 1.32598751578922 -0.498203401886121 0.973412800608268 NA NA NA NA NA NA NA -0.75880210441117 -1.60191555375691 NA -0.730698322766311 -0.618283196186879 1.2084626107289 -0.224830253158865 NA -0.393452943028014 NA NA NA -0.196726471514007 -0.196726471514007 -1.18035882908404 NA -0.168622689869149 -0.477764287962588 -0.786905886056028 -0.112415126579433 -0.140518908224291 -0.871217230990602 1.71433068033635 1.68622689869149 -0.140518908224291 NA -0.252934034803723 2.30451009487837 2.64175547461666 0.393452943028014 -0.365349161383156 1.68622689869149 -0.477764287962588 0.590179414542021 -0.618283196186879 -0.871217230990602 NA 1.03983992085975 0 NA NA 0.0281037816448581 -0.421556724672872 -0.252934034803723 -0.590179414542021 0.646386977831737 -1.7424344619812 -1.15225504743918 -0.224830253158865 0.112415126579433 -0.927424794280318 -0.786905886056028 -1.26467017401862 -1.2084626107289 -0.393452943028014 1.09604748414947 0.786905886056028 0.505868069607446 0.590179414542021 -0.0281037816448581 NA -0.168622689869149 1.01173613921489 0.477764287962588 1.77053824362606 0.815009667700886 2.16399118665408 -1.96726471514007 -2.19209496829893 -1.5457079904672 3.20383110751383 1.37708530059805 0.590179414542021 1.65812311704663 -0.0562075632897163 -1.18035882908404 0.0281037816448581 -0.702594541121453 -0.89932101263546 0.309141598093439 1.09604748414947 -0.140518908224291 0.309141598093439 0.955528575925176 0.674490759476595 0.702594541121453 1.15225504743918 NA NA 0.463712397140159 0.266246352424972 -1.75722592600481 -0.656741002648264 -0.936792721495271 -0.795295074606732 0.291943761564496 -0.231541603999428 0.412748076694633 NA 0.05 0 -1.43329286388777 -0.427725847472963 -0.0143508672229063 NA NA 1.69259001906391 -0.0381787222345242 -0.826283489388896 NA -0.522698029564294 NA NA NA NA NA 0
RV3797 NA NA NA 0.381233907530249 0.293256851946346 1.26100446336929 0.146628425973173 NA -0.967747611422941 0.363187332025859 -0.95985223463977 -0.0259419522875614 -0.436435197308385 0.71416668650463 0.575300941906508 -0.991898175700875 -1.94412042437372 -0.972060212186858 0.039675927028035 0.674490759476595 0.515787051364455 0.972060212186858 0.991898175700875 -0.562075632897162 -0.947498924026645 0.674490759476595 -0.658431455679533 0.314762354422411 -1.21408336705787 -0.614536025300898 -0.614536025300898 0.374717088598108 1.7236986075513 0.284784987334562 -1.69372124046345 0.919760126558993 -0.764422860740141 NA -0.514742948021612 -0.550242461678275 -0.922987355073235 -0.195247325111646 NA 0.301745866081635 NA 1.06498540969989 NA 2.12997081939977 -1.33123176212486 0.275928037967698 NA -1.04239481010019 -0.245269367082398 -0.153293354426499 NA 0.352574715180948 NA -1.71688556957679 -0.735808101247195 0.291257373410348 NA -0.643832088591295 0.613173417705996 NA 1.16502949364139 0.536526740492746 0.597844082263346 1.33365218351054 NA -1.47161620249439 -0.597844082263346 -0.321916044295648 NA 0.659161424033945 0.413892056951547 -0.306586708852998 -0.199281360754449 NA 1.01173613921489 0.781796107575145 -1.57892155059294 0.981077468329593 1.22634683541199 NA 0.751137436689845 1.33365218351054 -0.122634683541199 -0.245269367082398 0.889101455673694 NA 0.628502753148646 0.781796107575145 1.97748427210184 0.275928037967698 0.0306586708852998 0.643832088591295 NA NA NA NA NA -0.927424794280318 -0.0843113449345744 0.252934034803723 -0.11480693778325 NA 1.81269391609335 0.650401803781003 1.03582509491049 -0.385423291129483 NA NA NA 0.0172946348583743 -1.38933566695606 1.71216885097905 NA NA NA NA NA NA NA NA -0.192711645564742 NA -0.385423291129483 -0.674490759476595 1.09845637971903 -0.925015898710759 -0.713033088589544 -0.115626987338845 NA NA NA -0.55886377213775 -0.443236784798905 -1.25262569617082 NA -0.944287063267233 -0.481779113911854 -0.154169316451793 -0.55886377213775 -0.46250794935538 -0.385423291129483 1.6380489873003 1.23335453161435 0.481779113911854 0.982829392380182 -0.0385423291129483 1.59950665818735 1.6380489873003 -0.0192711645564742 -1.52242199996146 1.13699870883197 -0.982829392380182 NA NA NA -0.154169316451793 0.905744734154285 1.09845637971903 NA NA 0.289067468347112 0.250525139234164 -1.52242199996146 -0.925015898710759 0.751575417702492 -0.635948430363647 -0.635948430363647 -0.713033088589544 0.173440481008267 -0.867202405041337 -0.501050278468328 -0.134898151895319 NA -0.385423291129483 1.48387967084851 -0.0963558227823707 -0.211982810121216 0.46250794935538 0.404694455685957 0.616677265807173 0.828660075928388 0.847931240484862 1.67659131641325 1.25262569617082 0.944287063267233 1.92711645564741 -1.67659131641325 -2.04274344298626 -1.54169316451793 0.134898151895319 2.00420111387331 -0.0963558227823707 1.29116802528377 -0.173440481008267 -0.770846582258966 -1.05991405060608 -0.520321443024802 -1.15626987338845 1.44533734173556 0.404694455685957 0.655219594920121 0.115626987338845 2.27399741766395 1.7922183037521 0.346880962016535 -0.616677265807173 -1.48387967084851 NA -0.620096343389773 0.267365706459191 -0.44966050631773 0.498272452946674 -1.05220558478349 -0.64287400512613 -0.263472952920545 -0.200239444219614 0.853652367462566 0.508462264836203 1.3 0 -3.67222746826146 0.0870310657389154 0.0638991245819932 -0.522730338594361 NA 0.0168622689869149 0 -1.41686899352753 0.674490759476595 0 NA NA NA NA NA 0
[+] Show/hide bicluster #376 motif PSSM #1. bicluster 376 motif PSSM #1 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 1 0 0 0
2 0 0 0 1
3 0.4 0.6 0 0
4 0.2 0 0.8 0
5 0.6 0.2 0.2 0
6 0.2 0.8 0 0
7 0.2 0.8 0 0
8 0.2 0.6 0 0.2
9 0 0.6 0 0.4
10 0.8 0.2 0 0
11 0.4 0 0 0.6
12 0 0 1 0
13 0.2 0.4 0.4 0
14 1 0 0 0
15 0.8 0 0 0.2 [+] Show/hide bicluster #376 motif PSSM #2. bicluster 376 motif PSSM #2 Mycobacterium tuberculosis H37Rv 7x4
POSITION A C G T
1 1 0 0 0
2 1 0 0 0
3 0 0 0 1
4 0 0 0.5 0.5
5 0 1 0 0
6 0 0 0 1
7 0 0 0 1 |